Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00491 ATGAGTATGATCTTCTTGGCTGAAGAAAAAGGCCCAAGAAAAGAGAGGTTGGTGTTTTGGTTTGGAAAGATGAACATGGGTGGGAGGTGGAACTACGACCATGCGTTTTTTATGTTGTCTCTGCTTCTTGTTGGAAGCAGCACCGTAGTTGGCTTGGCAGAAGCAGGTTCCAGAGTTGCAACAGAAGGCTGTGAACGAGGGTACAACAAATCTGTTGGGAAAAAGTTGTATTGCTGGAATCCTGCCATGGATGTTTTTGATGTCTTCGATGATCACACAAACCAGGATGAACGACAAAGACAACTGAGAACTGAGAAGAGACTGAATGTTGCCCTCGCGCATGTCAACCTCTCCGCCAACACGCCCCGTCATGGTAGGGCCGTCCATGAGGCCGCCGACAGAGTCCTCGCCGCCGCCGACTGCGGGAGGACCCGCTTCATATTCTTCATAATGATATCTCTTCTGGCTCTAAAAAGGGCACCAAGGGTTCTTGCAAATCTGAGTTTACGGGAAACAGAGTACACTGAGCATATTGTGCCATCAACTGGTCCACAAGGATCATGGCGACCACGAGCTATCAACTCTAAGCCCCAGTTCAGCGTCCTCCATCTCAAGGGAAAAACCCTTCCCTCCGTTCAGCGCAAAGTTAGAGTCTTCGGCGGGTTGGTTCCCGGTTGCAGAAAAGAACCCCTTTCGATCATTCTCGAAGAAGCCATCGATTACATACCAGTGGAATCCAGTGAAAAATACATGAACGACACTTCTTTCTCCAACGCCGAGAACCTTTACTTGGACGAAGCTGATAAAGCTTGGACCACCCACATTAACGTTCTACGAATCTCGATCTCCGACTGGTTCACCTTAAAGCTGTTTTAG 876 0.4863 MSMIFLAEEKGPRKERLVFWFGKMNMGGRWNYDHAFFMLSLLLVGSSTVVGLAEAGSRVATEGCERGYNKSVGKKLYCWNPAMDVFDVFDDHTNQDERQRQLRTEKRLNVALAHVNLSANTPRHGRAVHEAADRVLAAADCGRTRFIFFIMISLLALKRAPRVLANLSLRETEYTEHIVPSTGPQGSWRPRAINSKPQFSVLHLKGKTLPSVQRKVRVFGGLVPGCRKEPLSIILEEAIDYIPVESSEKYMNDTSFSNAENLYLDEADKAWTTHINVLRISISDWFTLKLF 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00491 291 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 111 242 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00491 Vimu-Chr3 4757045 4759473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00491 123 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 40.833 2.60e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00491 - - gmx:100786088 123.25