Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00458 ATGGAGACGAAGCCGAGCGAGATCAGCAGCGGGAAGATGTTCGGAGGCTACAACAAGAGGTTCAAACATTTCAGTCCCACACTAGGCTGCTCCATGAATTTCCACATCTACTTCCCTCCTTCTCCTTCTCCCTCTCACAAATTCCCAGTTCTGTATTTTCTCGCTGGCCTCACATGCACCGATGAAAACTTCATATTCAAGTCTGGTGCTCAACGTGTAGCTGCTGCTGAGGGCATTGCCTTGGTTACTCCCGACACTTCCCCAAGAGGCTTGAATGTGGAAGGAGAAGCTGACAGCTGGGATTTTGGAGTAGGATTGAAATGGTTCTTTGGCAGGCTGTTGGCATTGCCATTCCCCATAACTCAGAAAAATAATGCCAAGCTGGATCAAAAAGTGTTAGAACTAAGAACTGCTCAAATGGCTGCCCAGTTCTATGGCAGTGCACTACTAAACATAAAACTTCATCTAATTCTGTTTGGACATGGAGGGGAAAATGAAGGTACTGATTTACGGAGAGCTGGATTTTATCTCAATGCCACACAAGAGAAATGGAAAAATTGGCGCATGTACGACTATGTTGTCAAGGAATTGCCAAAGCTTCTCAGTGATAATTTTCCACAGCTCGAAACATCAAAGGCTTCTATATTTGGTCATTCTATGGGTGGGCATGTGAATGTTGCAGAACAGTACAGTGCTAATAAGAGAAAAATATTCAGCGGAAAAGAGAATGTTGAGGGGAAGATGTCAGTTTCTGCCTTTGCTCCAATTACGAATCCTATAAATTGTCCTTGGGGACAGAAGGCATTCCCAAATTATCTCGGTGACAATAAATCTGAGTGGGAGGAGTATGACGCCACTTGTTTGGTAACGAAGTTTCCCAATGTATCTTCCTCTATTTTGATTGATCAGGGCGAAGATGACCAATTTTTTCCATATCAACTGCTGCCTCACAACTTTGAAGAGGCTTGCAGAAAAGCCAATGTTCCGCTACTGTTACGTTTCCATCCTGGTTATGACCACGGGTACTATTTTATAGCCACATTCGTAGATGATCACATCCGACATCATGCTCAGGCTCTTAGGCTTAATTAA 1092 0.4377 METKPSEISSGKMFGGYNKRFKHFSPTLGCSMNFHIYFPPSPSPSHKFPVLYFLAGLTCTDENFIFKSGAQRVAAAEGIALVTPDTSPRGLNVEGEADSWDFGVGLKWFFGRLLALPFPITQKNNAKLDQKVLELRTAQMAAQFYGSALLNIKLHLILFGHGGENEGTDLRRAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFPQLETSKASIFGHSMGGHVNVAEQYSANKRKIFSGKENVEGKMSVSAFAPITNPINCPWGQKAFPNYLGDNKSEWEEYDATCLVTKFPNVSSSILIDQGEDDQFFPYQLLPHNFEEACRKANVPLLLRFHPGYDHGYYFIATFVDDHIRHHAQALRLN 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00458 363 Gene3D alpha/beta hydrolase 136 363 IPR029058 -
Vimu3g00458 363 Gene3D alpha/beta hydrolase 6 112 IPR029058 -
Vimu3g00458 363 Pfam Putative esterase 25 107 IPR000801 -
Vimu3g00458 363 Pfam Putative esterase 153 354 IPR000801 -
Vimu3g00458 363 PANTHER S-FORMYLGLUTATHIONE HYDROLASE 172 361 IPR014186 GO:0018738|GO:0046294
Vimu3g00458 363 SUPERFAMILY alpha/beta-Hydrolases 171 360 IPR029058 -
Vimu3g00458 363 SUPERFAMILY alpha/beta-Hydrolases 9 110 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00458 129 362 Carbohydrate Esterase AT2G41530 62.979 8.97e-100 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00458 K01070 - cit:102629058 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00458 3 4484494 4490038 Vimu3g00458 3 4484494 4490038 ECH