Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00425 ATGTCAGACATTCTCAAAAAGATTGCTGCCCCAGAAAATTTTGTAGTTAAGGTGAGTAGGAAAAGTGTTGTGAAAGCACTGAATCCTCCACAAGAACCATTTTCAATCACTCTCTCAAATCTTGACCTGCTTTCAGGTCGTTTTCCTGTTACATACTTGTATTTTTACCGCAAACCAGAATCAGATAACTTCAAGGCTTTTGTTGATGCTCTTAAAAGCTCTCTGGCACAAATACTTGATCACTATTATCCCTTTGCTGGCCAAATTGTTCAAAATCCTAAAACCAGTGAGCCTGAGATCATATGTGACAACAATGGTGCTCTAATCATTGAAGCACACACAGATACCCCATTAAAGAGAGTAGATTTTTATGATCTAAACAAAACTCTTCAAGATAAGGTAGTCTCAGTTGAACCAGATTTCCCGACGCAAATTCAGGTGACTGAATATTCATGTGGAGGTATGTCTATAGCCTTTACTTTTGATCATGCATTAGGTGATGCCACTTCATTTGGTAAGTTCATTGCTTCCTGGTGTGAAATGGCTCAAAAGAAACCACTCTCGTGCATACCAGACCATACTAGACACCTTCGTGCACGTTCTTCTCCCACTTATCAACCATCCTTGGATCAAAATTTTGTGAGGTGCACCATGGAAGAGATACAGAACATGCCAATGAACCATATCTCACTGAAGCGCCTTTATCATATCAAAGCATCAAGCATCAACATGCTGCAGAAACTTGCTTCTGGGAATGGAGTCAAGAAAACAAAGATTGAGGCTTTCTCCGCGTATGTATGGAAGATAATGATTGGTAGCATTGATCAAAGGCATGAAAAGTGCAGGATGGGTTGGCTGGTGGATGGAAGAGAAAGGATGGGAAAAGGTGAGAATTTGATGTCAAATTACATTGGTAATGTGCTGTCTGTGGCATTTGGGGAGGCAAGTATTGAAGAATTGAAAGAAGGGTCTATATCAGACATTGGTAACACAGTGCATGAGGCAATATCAAAGGTGAACAATGAGGATCATTTTTTGGACTTGATTGATTGGATTGAGTGTCATAGGCCTGGTTTGATGCTAGCAAAGGCAGTGTTGGGTGAACAAGTACCAACCATAGTGGTGTCCTCTGGACAAAGGTTTCCTGTTACTGAGGTTGACTTTGGATTTGGGAGCCCCTTGCTGGGGACAGTTTACACTAGTATTCCAAGGGTAGGAGTTGGTTATATGAACCAAAGGTTAAGTGCCAAGGGTGATGGTTCATGGACCGTGTCTGCCATTTTGTGGCCAGAACTGGAAGATGCACTGCAGAATGACCCAATTTTCCACCCAATGTCTGTTTCTCATCTTCAACTTTAG 1359 0.415 MSDILKKIAAPENFVVKVSRKSVVKALNPPQEPFSITLSNLDLLSGRFPVTYLYFYRKPESDNFKAFVDALKSSLAQILDHYYPFAGQIVQNPKTSEPEIICDNNGALIIEAHTDTPLKRVDFYDLNKTLQDKVVSVEPDFPTQIQVTEYSCGGMSIAFTFDHALGDATSFGKFIASWCEMAQKKPLSCIPDHTRHLRARSSPTYQPSLDQNFVRCTMEEIQNMPMNHISLKRLYHIKASSINMLQKLASGNGVKKTKIEAFSAYVWKIMIGSIDQRHEKCRMGWLVDGRERMGKGENLMSNYIGNVLSVAFGEASIEELKEGSISDIGNTVHEAISKVNNEDHFLDLIDWIECHRPGLMLAKAVLGEQVPTIVVSSGQRFPVTEVDFGFGSPLLGTVYTSIPRVGVGYMNQRLSAKGDGSWTVSAILWPELEDALQNDPIFHPMSVSHLQL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00425 452 Pfam Transferase family 16 428 - -
Vimu3g00425 452 Gene3D - 11 212 IPR023213 -
Vimu3g00425 452 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 24 399 - -
Vimu3g00425 452 Gene3D - 215 438 IPR023213 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00425 39 431 Monolignol Biosynthesis Gene Families AT5G48930 26.699 9.22e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00425 - - gmx:100795616 796.578