Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00360 ATGGTTCAGAACGATCACATCAACAAGGAGAGAGACCTTGAGTTTCTGTTTGAGGACGAGGACGACGATGCAGAACAGCAGCAGGACATTGAAGCTGACAAGTACCAAAGTAGCAGTGAAGAAGACAGTGATATCGAGCCTCGCTCTTTCTCTTCTCACCAATGGCCTCAGAGTTACAAAGAGACTACGGATTCTTACACAATAGCTGCTGCTCCAAATCTGGAGTCAGTTCTGCGAGGGCCGAGTTTTATATATTCTAGTTTTGACAATCGTTCAAAGAGTAGCTTAGACATTGATGGAAGGACACCTTTTCTATCTTCTGAAGGCATTAATCAATCAACTTGGTGGGAGAAAGCTTCAGTACAACGCCATTTCACTGGAGAATTACCCATTGGATATGGATGCAGCTTCACTCAGACAGTTTTCAACAGCGTTAATGTGATGGCTGGAGTTGGCCTTCTATCTACACCATACACAGTGAATCAAGCTGGCTGGATTGGCATTGCAGTGATGCTCTTCTTTGCAGTTATTTGCTGTTATACAGCCACTCTTATGAGACACTGCTTTGAAAGCAGAGAAGGAATCACTACCTACCCAGATATAGGAGAAGCTGCATTTGGAAGATATGGCCGTATTGTTGTATCGTCATATTGTGTGGAGTTCATCACCTTGGAAGGAGACAACCTCAGTAGTCTGTTTCCTGGTACTTCCTTAAATCTGGGTATTTTCCAGTTAGACACTATGCATCTCTTTGGAGTTCTGACAGCACTTATTATTCTCCCAACTGTTTGGTTGAAGGATCTTCGCCTAATTTCTTATCTATCAGCTGGAGGGGTTGTTGCAACACTTTTGATTATTATCTGTGTGCTTTTTGTTGGGACCACAGAAGGTGTTGGATTCCATCACACTGGTCAATTGGTAAAGTGGAATGGCATTCCATTTGCTATTGGTGTCTATGGATTTTGCTTTGCAGGACATTCGGTTTTCCCAAACATTTATCAGTCCATGGCTGACAAGAAACAGTTTACCAAAGCCCTCATAACATGTTTTTCTTTGTGTGTTTTGATATACGGAAGCGTTGCAATCATGGGATTTCTCATGTTTGGTGATGGCACTTTGTCTCAGATAACATTGAATATGCCACCAGGTGCTATTGCTTCCAGAATTGCATTGTGGACAACGGTTATTAACCCATTCACTAAATATCCTTTATGCCAAAGCTATATAATTTATGAAAGATTGTTTATTGGTTTATGGAGTTTAGAGGAGTTGCTGCCAGAGAGAATTTCAACCACATATTGGTGTTTCATTCTTCTTAGAACAGCCCTTGTTGCATCTACAGTTTGTGTTGCTTTTCTGGTTCCATTTTTTGGACTTGTGATGGCTTTAATTGGTTCTCTTTTCAGTTTACTTGTGTCAGCGATAATGCCAACTTTATGTTTCCTGAAAATTATTGGGAAAAAAGCGACAAAGACACAGGTTGCACTCAGTGTGGCAATTGCTGTACTTGGAATGATTTGTGCAGTCCTTGGAACATACTCCTCTGTGTTGAGTATTGCAGACAGTTACTGA 1572 0.4122 MVQNDHINKERDLEFLFEDEDDDAEQQQDIEADKYQSSSEEDSDIEPRSFSSHQWPQSYKETTDSYTIAAAPNLESVLRGPSFIYSSFDNRSKSSLDIDGRTPFLSSEGINQSTWWEKASVQRHFTGELPIGYGCSFTQTVFNSVNVMAGVGLLSTPYTVNQAGWIGIAVMLFFAVICCYTATLMRHCFESREGITTYPDIGEAAFGRYGRIVVSSYCVEFITLEGDNLSSLFPGTSLNLGIFQLDTMHLFGVLTALIILPTVWLKDLRLISYLSAGGVVATLLIIICVLFVGTTEGVGFHHTGQLVKWNGIPFAIGVYGFCFAGHSVFPNIYQSMADKKQFTKALITCFSLCVLIYGSVAIMGFLMFGDGTLSQITLNMPPGAIASRIALWTTVINPFTKYPLCQSYIIYERLFIGLWSLEELLPERISTTYWCFILLRTALVASTVCVAFLVPFFGLVMALIGSLFSLLVSAIMPTLCFLKIIGKKATKTQVALSVAIAVLGMICAVLGTYSSVLSIADSY 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00360 523 FunFam Amino acid transporter AVT1A 133 522 - -
Vimu3g00360 523 PANTHER OS05G0424000 PROTEIN-RELATED 140 504 - -
Vimu3g00360 523 MobiDBLite consensus disorder prediction 1 57 - -
Vimu3g00360 523 MobiDBLite consensus disorder prediction 34 48 - -
Vimu3g00360 523 Pfam Transmembrane amino acid transporter protein 136 516 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00360 Vimu-Chr3 3437616 3443173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00360 18 458 Amino Acid or Auxin Permease AAAP Family AT2G41190 58.230 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00360 K15015 - gmx:100790344 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00360 3 3437616 3443173 Vimu3g00360 3 3437616 3443173 ECH