Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00355 ATGGAACAAACCATGCTTGAAGCCATTCAGTTCAACGAGGAAATCCAAGGCATCATAGCTCCGGCGCCGGAAACCGCCAGTTCCTTCACTGCACTGCTCGAACTCCCGCCGACGCAGGCCGTCGAGCTCCTCCATTCGCCGGAGCGAGCCGGGAAACCACCGCGCCATAATCCAAAACCCTATCCGTTGACCTCATTTGCCTCCGCCTCCGCTTCGTCCGCCAACCTGACCTTCCCGCTCTCCGTCTTCGCCGGAGAGAATTCTAACTCGAACTCCAACTCGAACTCGACGGAGATTAAGCGAGAGCTGCCGGAGACCGATTCCAACCCGAGTTCAACTCAGGGCGGCGGCTCCGCCTCCGATCCCGCCCTGGAGAACAAGGACGAGAAGGGCCTGAAGAGGAAGGAGCGAGAGAAGAAGGGAGTCTCTCCAATGGACTGTAACTTCCCTCCCACAGTTGCACCCGTCGTCTGGCCTGAAATCCCGCAGAATGCAAACAGACAACAATATCAGCAACCGTGGCAGTTCGATGCATTCCACCACCAGCCCATTTGGGGCAGGGAAGAAGACAACACGAATTTTATGACTCCAGAAAACTCACTCTTGAGTTATGACTCATCGGCTAATTCAGGTAAATCAGACTTAAGCTTCTATCTCACCCTTTCCTCCCAGAAGTCCCATTCAACAAAAATTTGTATTTAA 702 0.5385 MEQTMLEAIQFNEEIQGIIAPAPETASSFTALLELPPTQAVELLHSPERAGKPPRHNPKPYPLTSFASASASSANLTFPLSVFAGENSNSNSNSNSTEIKRELPETDSNPSSTQGGGSASDPALENKDEKGLKRKEREKKGVSPMDCNFPPTVAPVVWPEIPQNANRQQYQQPWQFDAFHHQPIWGREEDNTNFMTPENSLLSYDSSANSGKSDLSFYLTLSSQKSHSTKICI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00355 233 MobiDBLite consensus disorder prediction 86 147 - -
Vimu3g00355 233 MobiDBLite consensus disorder prediction 40 66 - -
Vimu3g00355 233 MobiDBLite consensus disorder prediction 123 143 - -
Vimu3g00355 233 MobiDBLite consensus disorder prediction 106 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00355 Vimu-Chr3 3407981 3413162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00355 6 138 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 33.537 4.29e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00355 - - gmx:100799133 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00355 3 3407981 3413162 Vimu3g00355 3 3407981 3413162 ECH
Vimu6g02991 6 26385836 26387052 Vimu3g00355 3 3407981 3413162 PCT