Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00348 ATGGCTGGTTTTGGTGACTGTTTTGTGTTGCTTCTCTTGTGGCTATCCTCAATATTCTTGTTACATGTAATCCTCAGAAAGTTTGGTATGAGGCGAAGGCCACGGCTACCACCAAGTCCTACAGCCGTCCCTGTATTAGGACATCTCCACCTCCTCACCAACCTCCCCCACCAAGCATTTCACAAAATCTCATCACGCTATGGCCCTTTGGTCTACCTCTTCCTTGGTTCCAACCCTTGTGTTCTTGTTTCATCGCCTGAAATGGCAAGTCAGTGCCTCAAAACCAACGAATCATGCTTCCTAAACCGACCCAAAAGAACAAATATGGACTACATCACATACGGTTCTTCAGATTTTGTGCAGGCACCCTATGGACCTTATTGGAGGTTCATGAAAAGGCTTTGCATGACTGAACTCCTCGGAACCCGCATGCTTCAGCAGCACCTTCCCATTAGAGCTGAGGAGACAAGGCTGTTCTTGAACACCATCATGCAAAAGGCTGCTTTGAGAGAGGAGGTCAACATAAGCAAGGAGCTAGCCATGCTCACAAATAACATAATCACAAGAATGGCTTTGAGAAGAAGGTGTTGTGATGTTGAAGGGGAAGGGCACCAGTTGATTGAGCTGGTGAAAGAGATGACTGAGCTTTGTGGGAAGATCAACTTGGGAGACACGTTGTGGTTTGTTAGGAAGTTGGATTTGCAGGGGTTTGGTAAAAAGCTTGAGAGAGTTAGAAGTAGGTATGATGCCATAATGGAGAAGATCATAAAGGAACACGAAGATGCAAGAAGAAAGAAGGAAAAAGGTGGTGATGGAGATGAAACAGTGAAGGATTTACTTGATATTCTGCTTGATATCTATGCTGATGAACATTCAGAGGTTAGATTAACAAGAGAAAATGTCAAGGCCTTCATATTGAATATGTTTGGTGCTGGAACTGAGACATCAGCCGTTACAATAGAGTGGGCTTTGGCTGAGCTAATGAACCATCCAGACATGATGGTAAAAGCAAGGGAAGAGATTGAATCAGTGGTTGGTAAGAAGAGATTGGTGGAGGAATCAGATATTCCTAACCTTCCTTATGTTCAGTCCATAGTGAAGGAAACAATGAGGCTTCACCCCACAGGACCTTTGATAGGGAGGCAATCCACTGAAGATTGTAATGTTAAAGGGTATGAGATTCCAGCAAAAACCACTGTGTTTGTGAATGTATGGGCCATTGGTAGAGATCCAAAGTACTGGGAAAACCCACTTGAGTTCAAGCCAGAGAGGTTCATTGATGAAGAGGGAAAAAGCCCTTTGGATTTGAAGGGGCAGCATTTTGAACTTTTGTCATTTGGAGCTGGGAGAAGAAGCTGCCCTGGGGCTTCACTGGCTTTGCAGATCGTTCCCACAACACTGGCTGGAATGATTCAGTGTTTTGAATGGAAGGTTGGTCAAGATGGAAAAGGTGTAGTTGACATGGAAGAGGGACCTGGAATGGCACTTCCTAGGGCACATCCCTTGCTATGTCTTCCAGTTGTTAGGTTTTCCTCCTTTCTTTAA 1545 0.446 MAGFGDCFVLLLLWLSSIFLLHVILRKFGMRRRPRLPPSPTAVPVLGHLHLLTNLPHQAFHKISSRYGPLVYLFLGSNPCVLVSSPEMASQCLKTNESCFLNRPKRTNMDYITYGSSDFVQAPYGPYWRFMKRLCMTELLGTRMLQQHLPIRAEETRLFLNTIMQKAALREEVNISKELAMLTNNIITRMALRRRCCDVEGEGHQLIELVKEMTELCGKINLGDTLWFVRKLDLQGFGKKLERVRSRYDAIMEKIIKEHEDARRKKEKGGDGDETVKDLLDILLDIYADEHSEVRLTRENVKAFILNMFGAGTETSAVTIEWALAELMNHPDMMVKAREEIESVVGKKRLVEESDIPNLPYVQSIVKETMRLHPTGPLIGRQSTEDCNVKGYEIPAKTTVFVNVWAIGRDPKYWENPLEFKPERFIDEEGKSPLDLKGQHFELLSFGAGRRSCPGASLALQIVPTTLAGMIQCFEWKVGQDGKGVVDMEEGPGMALPRAHPLLCLPVVRFSSFL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00348 514 SUPERFAMILY Cytochrome P450 37 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00348 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Vimu3g00348 514 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00348 514 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00348 514 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00348 514 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00348 514 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00348 514 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00348 514 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00348 514 Gene3D Cytochrome P450 25 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00348 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 503 - -
Vimu3g00348 514 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00348 514 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00348 514 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00348 514 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00348 514 Pfam Cytochrome P450 37 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00348 514 FunFam Cytochrome P450 family protein 29 504 - -
Vimu3g00348 514 CDD CYP93 68 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00348 Vimu-Chr3 3316095 3317988 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00348 9 509 Cytochrome P450 AT5G06900 52.883 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00348 K24188 - gmx:100807524 827.009