Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00229 ATGGAACACAGCAATCATCACCACAGCAGATGCCCCTATTACAAACTCGGAGTTCTTCTTTTACTTCTGGCTCTACAGTCGCAACAACAAATCTTCAAGGAGTTCACTCTAATGATGGAATCAATTTCAAAGGGCACAAGGGGATGGAAGGAGAGGCTGTTCTCTCCTAATTCTTCTGTGTCAGAACTTGGTTCTGAAGTTAGGAGAGAATTGAATGCCAAAATTGCTAGTGTGTCCCGATTGATTGAGCGCCTTGAAACAGCAAGAGAAAATAAGAGCGCTGCAGGCACTTCTGTATCAAATCATTCTAACGCAGAGACCAGCAACAACCAAAACAATGTGGAAGTTCACGGAGAGAACTCTTTTCCTGGCAGTAATACTTCTGCTACTTTTTCTGCCTCCCCAGATTCAAAGTGA 417 0.4341 MEHSNHHHSRCPYYKLGVLLLLLALQSQQQIFKEFTLMMESISKGTRGWKERLFSPNSSVSELGSEVRRELNAKIASVSRLIERLETARENKSAAGTSVSNHSNAETSNNQNNVEVHGENSFPGSNTSATFSASPDSK 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00229 138 Coils Coil 68 88 - -
Vimu3g00229 138 MobiDBLite consensus disorder prediction 87 138 - -
Vimu3g00229 138 MobiDBLite consensus disorder prediction 91 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00229 Vimu-Chr3 1991200 1995287 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00229 K19043 - gmx:100803582 145.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00229 3 1991200 1995287 Vimu3g00229 3 1991200 1995287 ECH
Vimu6g02226 6 19504953 19509842 Vimu3g00229 3 1991200 1995287 PCT