Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00203 TCACATCCTAAAGCATTCAAAATTCAAAAACTCAGTTTCAAGAATTTCCCAAAACCCTTTTGTTCTCGAATTTCTCACACGGTTAATACAACAATGGGCTTCCGGTTACCCGGTATCAGAAGGACTTCATCTGGCAGAAATGAAGCATCTTCAAAAGTGTTGGATGCGCCAAAGGGATACCTTGCAGTCTATGTGGGAGAGAATATGACACGGTTTGTGATTCCTGTATCACACTTGAACCAACCTCTATTCCAAGAGTTGTTGAGTCAATCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGCGAACATGTCTTCCGACATATTATTTCTTGTTTGAGTGGACAATAA 372 0.414 SHPKAFKIQKLSFKNFPKPFCSRISHTVNTTMGFRLPGIRRTSSGRNEASSKVLDAPKGYLAVYVGENMTRFVIPVSHLNQPLFQELLSQSEEEFGYDHPMGGLTIPCSEHVFRHIISCLSGQ 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00203 123 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 51 119 IPR003676 GO:0009733
Vimu3g00203 123 Pfam Auxin responsive protein 40 120 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00203 Vimu-Chr3 1734256 1734855 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00203 55 122 Calmodulin-binding Proteins AT3G43120 50.000 1.25e-20 80.1