Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00111 ATGGCAGGAGAACTAAGAGTGTTGAATGCACTTGATGTGGCGAAGACACAATGGTACCACTTCACAGCAATTGTGATAGCAGGAATGGGTTTCTTCACTGATGCCTATGACCTCTTCTGCATTTCCCTGGTTACTAAGCTGTTAGGGAGACTATACTACACAGAACCAGGTGCACCAAAGCCAGGAACTCTTCCTCCAAGAGTTCAAGCTTCTGTCACTGGTGTTGCACTATGTGGCACCTTAGCTGGTCAACTTTTCTTTGGTTGGCTTGGTGACAAATTGGGGAGAAAAAGGGTCTATGGTCTCACTCTTGTGCTCATGGTGGTCTGCTCCCTTGCCTCAGGACTCTCCTTTGGCTCCACTCCAAAGGGTGTCTTGGCTACACTTTGCTTCTTCAGGTTCTGGCTAGGGTTTGGGATTGGTGGTGACTACCCTCTTTCTGCCACAATCATGTCTGAATACGCCAACAAAAAGACTCGTGGGGCATTCATTGCAGCAGTGTTTGCCATGCAAGGGTTTGGAATCTTGGCTGGTGGAATAGTCGCCTTGATTGTTTCATATGCGTATGACCAAAAGTACAACCTTCCCACATACGAACAAAATCCAGAAGGATCCATTATACAGCCATTTGACTATGTTTGGAGAATCATTTTGATGTTTGGTGCAGTTCCGGCAGCACTGACCTACTACTGGCGCATGAAAATGCCTGAGACTGCACGTTACACGGCCCTTGTGGCCAAGAATGCAAAACAAGCTGCTTCAGACATGTCTAAGGTGTTGCAAATGGAACTTGAAGCTGAAGAGGAGAAGGTGCAGAAACTGACACAGGAAAAAAGCCACAGGTATGGTTTGTTCAGCAAGGAATTTCTCAGACGCCATGGCCTGCATTTGGTTGGAACCACCACCACTTGGTTCTTGTTGGACATTGCATTTTACAGCCAGAACCTTTTCCAAAAAGACATCTTCAGTGCAATTGGGTGGATCCCTCCAGCAAAGACAATGAATGCAATTCATGAGGTTTACAGGATTTCAAGAGCACAAACACTGATAGCACTGTGCAGCACTGTGCCAGGTTACTGGTTCACAGTGTTTCTGATTGATTACATGGGCCGTTTTGCTATCCAATTGATGGGGTTCTTCTTCATGACAGTATTCATGTTTGCTTTGGCTATACCATATGATCATTGGACTGAGAAAGCAAACAGAATAGGGTTTGTGGTGATATACTCCCTCACCTTTTTCTTTGCCAACTTTGGTCCAAATGCCACAACATTTGTTGTGCCAGCAGAGATCTTCCCAGCAAGGCTTAGGTCAACCTGTCATGGAATATCTGCAGCTGCAGGAAAGGCTGGTGCAATTGTGGGAGCATTTGGATTCCTATATGCTGCACAAAGCAAGGACCCTAAAAAGACTGATGCAGGGTACCCTACAGGAATTGGGATTAAGAACTCACTCATTGTGCTTGGGGTTATCAACTTGTTGGGAATGTTGTTCACCTTTTTGGTTCCAGAATCAAAGGGTAAGTCACTGGAGGAGTTGAGTGGGGAGAATGATGGAAGTGCTGATGCTGAGCCTCAAGTTTCTGATAGGACAATTCCTGTTTGA 1605 0.4573 MAGELRVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRLYYTEPGAPKPGTLPPRVQASVTGVALCGTLAGQLFFGWLGDKLGRKRVYGLTLVLMVVCSLASGLSFGSTPKGVLATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSYAYDQKYNLPTYEQNPEGSIIQPFDYVWRIILMFGAVPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQMELEAEEEKVQKLTQEKSHRYGLFSKEFLRRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNAIHEVYRISRAQTLIALCSTVPGYWFTVFLIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWTEKANRIGFVVIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPKKTDAGYPTGIGIKNSLIVLGVINLLGMLFTFLVPESKGKSLEELSGENDGSADAEPQVSDRTIPV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00111 534 FunFam Inorganic phosphate transporter 1-6 19 528 - -
Vimu3g00111 534 CDD MFS_PhT 24 506 - -
Vimu3g00111 534 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 507 IPR020846 GO:0022857
Vimu3g00111 534 SUPERFAMILY MFS general substrate transporter 11 513 IPR036259 -
Vimu3g00111 534 Gene3D MFS general substrate transporter like domains 19 530 IPR036259 -
Vimu3g00111 534 Pfam Sugar (and other) transporter 24 513 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vimu3g00111 534 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 511 - -
Vimu3g00111 534 NCBIfam phosphate:H+ symporter 10 516 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vimu3g00111 534 Coils Coil 250 277 - -
Vimu3g00111 534 MobiDBLite consensus disorder prediction 510 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00111 Vimu-Chr3 854531 856472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00111 4 515 Inorganic Solute Cotransporters AT2G38940 79.883 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00111 K08176 - gmx:100780201 983.786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02719 6 23746992 23749587 Vimu3g00111 3 854531 856472 PCT