Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00059 ATGACCAACTTTTACAATGATGTGCTAAATCATGCACAATTCTTTGAACTTGGCAACAACACAAGTTCAAAAGGATGCAAGTTATGCAATCAAGTTTTCACTAACACTCAAGCTCTCTTAATCCATCTTGAGTCTCACATGGCACAAGAAGAAATAGCCATTAAAAGACTCTATTCATTGCCTCAACATGTCAATTCTCAAAAACAATTAGGTTTCCAATTGCCTATACAACCTATGATGGGTGATGGTAGGGTTTTTCAAGCACAAACTCAACCTATTTTGGAGATGACTCACTCAATTAGAAGAAATCCATTTTCCAATTCTAGTCAAGTTGGTTCTTCCTCCATACCAATTAGGAGAATGCAAATTCCATCACAAGTTTTTCCATATGGTGCAAGTATCAATGATGATGGGTCCAAGGCATACATCTTGAAGTTGGAGAAACCTATCAAAAAGATTGATTTCATTGACTTGGTTAACACAGATGATGACAACAACTCAGAAGTAGAAGAAGTAGATTTGAATTTAAAGCTATAA 537 0.3557 MTNFYNDVLNHAQFFELGNNTSSKGCKLCNQVFTNTQALLIHLESHMAQEEIAIKRLYSLPQHVNSQKQLGFQLPIQPMMGDGRVFQAQTQPILEMTHSIRRNPFSNSSQVGSSSIPIRRMQIPSQVFPYGASINDDGSKAYILKLEKPIKKIDFIDLVNTDDDNNSEVEEVDLNLKL 178
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00059 178 ProSiteProfiles Zinc finger C2H2 type domain profile. 24 51 IPR013087 -
Vimu3g00059 178 ProSitePatterns Zinc finger C2H2 type domain signature. 26 46 IPR013087 -
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vimu3g00059 None None None
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00059 - K09228 pvu:PHAVU_007G277300g 221.476