Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00054 ATGGGAAAAATTGGAGAGGTAGCAGAAGCAAGTGGGGAGGTAGAAAGATTTGCTTATTACGATAGGGGAAATCTTGCCGATGGAGGCAAAACAGCAATAGAGATAGTTTTCACCCGTTCTGATGTTGCTGGTGCGGGACGTGCTGGGCGCGTACTGGCATGTACGGTGGCGGCGCGTAATGCTACGGAGGTGAAAACCGTTGAGGATCGTGAAGAGGCCATTGGAGGCGGCGATAGGAGGCGCTTGAGGGGCTCGGCCTGGGCGGAGGTCGACAAGGAGAGCGAGGGGGTCCAAACGACTTCTAATGAAGAAGTCGTGCCCCCTGCACGACTTCACACTGTTCATTTGACCAGTGTTGAAGTAGTGCACCCCAAAAACGACTTTAAGACATGCCGTCAAAATGAGTCACAACCCGCAGGCCAACTCGGCCGTCACGGGTTCGGGGCGAAATCTAGCAGCGAAGGGTGGAGAAGAGCGGAGGCGGATCCGAGCAGGGCAAATGCACTGCACAACATGAAGAAGAAGAATGTCCAACAGCAGACGCGCGACGGTGGTGGCCACGACAAAGTCTCAATCGAATACGCCGTTAATGGTTGGGCGTTGCCGGAATGTCGCCGGAACTGTGTGCTATGTGTGCGTGATGATGAGAAGAGATTGGATGCAGGTTTTTGGTTTTTAATGAATGGGAAAAATGGAGTAGAAATGAAAGCTTATGAGGAGTGTTCTCGGAGCCGAGAAAAACATAGGCGCAAAGAAGTCTTCTTGGAGTGTTCTAAATCGCAAGGGTTTAGAGACGAAGAGCAGAAGAGAGGAATGACCATGGTGGTTCTGCTGAATATGTGGGTTCTGATCTCAAATTTTAAGTTGGCATACAATCTTCTTCGTTGTCCGGATGACACTTTCAACCGGGACTTAGCAAAGTTCCTTGATCGAAAAGTTCCGGCAAATGCGAACCCCGTGGATGAAGTGTTATGTTTTGATGTCATTGTTGACCGGGAAACGAATCTAACCCCAAATCGCGATTTCTGCAACCCAAACCCTAACTCAAAATTTTTTAACCACTGCCACGTTAATTTTAATAATAATTAG 1089 0.4913 MGKIGEVAEASGEVERFAYYDRGNLADGGKTAIEIVFTRSDVAGAGRAGRVLACTVAARNATEVKTVEDREEAIGGGDRRRLRGSAWAEVDKESEGVQTTSNEEVVPPARLHTVHLTSVEVVHPKNDFKTCRQNESQPAGQLGRHGFGAKSSSEGWRRAEADPSRANALHNMKKKNVQQQTRDGGGHDKVSIEYAVNGWALPECRRNCVLCVRDDEKRLDAGFWFLMNGKNGVEMKAYEECSRSREKHRRKEVFLECSKSQGFRDEEQKRGMTMVVLLNMWVLISNFKLAYNLLRCPDDTFNRDLAKFLDRKVPANANPVDEVLCFDVIVDRETNLTPNRDFCNPNPNSKFFNHCHVNFNNN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00054 362 MobiDBLite consensus disorder prediction 131 166 - -
Vimu3g00054 362 Gene3D alpha/beta hydrolase 258 350 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00054 Vimu-Chr3 415716 420295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00054 275 336 Carbohydrate Esterase AT3G05120 72.581 3.06e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00054 K14493 - gmx:100815161 112.464