Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00026 ATGCCACTGTTCATTCATGTTCTTCACTATATTATTTCTCATCTTTTATGTACCAAGGTGTTGATCCCCTGCTTGGAAATGCATAAGGAAGCTGAGGATGACTATGCCCACCTTTCTAGCTTACTTCAAGAGTTCACCAGGATTCCCAACATTGACAAGGCATGGCTTTTTAGCTCTCCAGGGTTGCACTTGCAAGGAATGTTTGCAGTTTCCCAATCAGATCTTTTAGCAAACACGAGGAGGACATCCATCATGTCCTGTAACATTCTAAAAGAAAGGGACAGTTCTGTGAAGTTTCTGTGGGCTCCGTTTCCAATAGAGATGTCTGGCGTGTCCATGATTGTTCCATCACCATCTGGCTCAAAGCTCTTAGTGATTCGAAATCCAGAGAATGAAGCTGCTTGTTGCTTTCAGATTTGGAGCTCTTCTCGAATGGAGAAGGAGTTCCACATTCCTCAATCACTGCATGGTTCAGTATACAATGATGGATGGTTTGAGGGTGTCTCGTGGAACACGAATGAAACATGTGTAGCATACATAGCAGAAGGGCCCTCTCCTGCACAGCTCACATTTAATGGTTTGGGGGGCTTCAAGATAGATGGTTGTGCTGATAAAGATTCAGGTTATTGGAAATGTCAAGGGGATTGGGAGGAGGACTGGGGAGAAACATATGCTGGAAAGAGACAGCCGGCACTATTTGTTATCAACATCAACAGTGGAGAGGTGCAAGAAGTCAAAGGAATTGACAAATCCTTGAGTATTGGCCAAGTTGTATGGGCTCCATTTACTGAAGGTTCAGAACAATACCTTGTTTTCGTTGGGTGGTCATCCAAGCCAAGAAAGCTTGGCATTAAGTATTGCTCTAACAGACCTTGCGCATTATATGCTGTTAGACTTAGAGCACTGCATCATGAGTCAAAATCTAATGAACCAGTGCTCCAGTCAACTGAAGAATTTCATGTGCTGAACCTTACTCAAACTATAAGCAGTGCATTCTTTCCACGGTTCAGTCCAGATGGAAAATTTCTTGTGTTTTTATCTGCAAGAAGTGCTGTGGACTCTGGAGTGCATAATGCTACAAATTCACTTCACAGAATTGATTGGCTAACTAATGGAAAACCTTTCCAGTCTTCCAAAATTTACGACATCAGTGAACCTTGTTTTGCTTTCTCATCTAGTACATTTATTATATACACTGGATTCAAGTCCAAGTTGTTGGATACACCTGGCCATGTAGTTTTTCATTTGTCTTTTCAATCAATTTTGGAGATTCCTATTGTGATGTGCGCTGAAGACGGTTGCTTCCCTGGGCTTTATTGTACCACACTTCATAGTAATCCTTGGTTGTCTGACAACTGCACAATGATTATATCATCCATCTGGCACAGCAGTGAAGTTCTGCTCTCAGTGAATGTATTGAGTGGGGAGATAGTACATATCAGCCCTGCAGATCCAAATTTCTCGTGGAATCTTCTTACGCTGGACGGGAACAATATTGTTGCCATTTCCAGCAGTCCGGTTGATTTTGCTCAAATATGGTATGGAAAGGCCATTAAGAAGGAGACAAACAATACTACATGGAGTTGGTCAAATATATCCAGTCCCATATTCAGATGCTCTGACAAGGTTAGATCTTTGCTGTCCTCTCTCCAGTCTAGTATACTGAGGATCTCGGTCAAGGATGCTCATGATGGTCAAACAAAAGGTTTTCAAGTTATTCTGGTTTCTTTCTCGTGGATATTCAGTGCTAAGTTGAATGACTTAATGAAATTTCAGATATGCTTTAATTTGTATCTGTATATTCTCAGAATCCAACTGATAAGGACTAAATTCACTATTGAAAATCATACTCTGATTGTTCCCTCCACCTCTCCCCAACATGCACTGTCCCCACCATGTGCTACAAAACCTTTTGAAGCTATATTTGTGTCTTCTAAAACCAATAGCAAGATTGAATTTGATCCGTTAATTGTGATCCTTCATGGAGGGCCCCAAGACGTCTCTTTGTCATACTTTTCTAAGTATTTGGCTTTTCTATCTACAGTTGGATACAGCTTGCTGATTGTAAATTACAGAGGTTCATTGGGATTTGGTGAGGAAGCATTGCAATCTCTTCCAGGGAATGTTGGGTCTCAGGATGTCAATGATGTTCTCTCTGCCATAGATCATGTCATCAACTTGGGTCTTGCCAGCCCATCTAAGATTACAGTAATGGGCATTTCACATGGTGGTTTTCTGACAACTCAGTTGATTGGCCAGGCACCAGACAAGTTTGTAGCAGCGGCTGCAATCAATCCTGTTTGTAACCTTGCACTGATGATTGGAACAACAGATATCCCTGATTGGTGCTATGTAGAAGCTTGTGGAACCACTGCCAGAAATTGCTTTACTGAACCACCTTCCGCAGATGATTTGACTCTCCTTTATAACAAGTCTCCCATTTCACACGTCTCAAAGGTAAAAGCACCAACACTATTCCTATTAGGTGCCCAAGATGTTCGTGTTCCAATTTATGATGGGTTGCAATATGCTCGGGCTTTGAAGGAGAAAGGTGTAGATGTCAAGATCATTATGTTTCAAAATGATGTTCATGCACTGAAAAGGCCACAATCTGACATGGAATCTTTCCTTAACATTGGGGTGTGGTTCAACAAGTACTGCAAATACGGGGCAAGTGAATCACAAGATTTCCTGAAGACCTAA 2703 0.4162 MPLFIHVLHYIISHLLCTKVLIPCLEMHKEAEDDYAHLSSLLQEFTRIPNIDKAWLFSSPGLHLQGMFAVSQSDLLANTRRTSIMSCNILKERDSSVKFLWAPFPIEMSGVSMIVPSPSGSKLLVIRNPENEAACCFQIWSSSRMEKEFHIPQSLHGSVYNDGWFEGVSWNTNETCVAYIAEGPSPAQLTFNGLGGFKIDGCADKDSGYWKCQGDWEEDWGETYAGKRQPALFVININSGEVQEVKGIDKSLSIGQVVWAPFTEGSEQYLVFVGWSSKPRKLGIKYCSNRPCALYAVRLRALHHESKSNEPVLQSTEEFHVLNLTQTISSAFFPRFSPDGKFLVFLSARSAVDSGVHNATNSLHRIDWLTNGKPFQSSKIYDISEPCFAFSSSTFIIYTGFKSKLLDTPGHVVFHLSFQSILEIPIVMCAEDGCFPGLYCTTLHSNPWLSDNCTMIISSIWHSSEVLLSVNVLSGEIVHISPADPNFSWNLLTLDGNNIVAISSSPVDFAQIWYGKAIKKETNNTTWSWSNISSPIFRCSDKVRSLLSSLQSSILRISVKDAHDGQTKGFQVILVSFSWIFSAKLNDLMKFQICFNLYLYILRIQLIRTKFTIENHTLIVPSTSPQHALSPPCATKPFEAIFVSSKTNSKIEFDPLIVILHGGPQDVSLSYFSKYLAFLSTVGYSLLIVNYRGSLGFGEEALQSLPGNVGSQDVNDVLSAIDHVINLGLASPSKITVMGISHGGFLTTQLIGQAPDKFVAAAAINPVCNLALMIGTTDIPDWCYVEACGTTARNCFTEPPSADDLTLLYNKSPISHVSKVKAPTLFLLGAQDVRVPIYDGLQYARALKEKGVDVKIIMFQNDVHALKRPQSDMESFLNIGVWFNKYCKYGASESQDFLKT 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00026 900 ProSitePatterns Prolyl endopeptidase family serine active site. 716 746 IPR002471 GO:0004252|GO:0006508
Vimu3g00026 900 Gene3D alpha/beta hydrolase 638 887 IPR029058 -
Vimu3g00026 900 Pfam Prolyl oligopeptidase family 672 888 IPR001375 GO:0006508|GO:0008236
Vimu3g00026 900 FunFam Acylamino-acid-releasing enzyme 630 887 - -
Vimu3g00026 900 SUPERFAMILY DPP6 N-terminal domain-like 104 506 - -
Vimu3g00026 900 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 31 888 - -
Vimu3g00026 900 SUPERFAMILY alpha/beta-Hydrolases 655 888 IPR029058 -
Vimu3g00026 900 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 32 300 IPR045550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00026 Vimu-Chr3 186772 195135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00026 652 871 Carbohydrate Esterase AT5G36210 25.000 6.07e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00026 K01303 - gmx:100803600 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00026 3 186772 195135 Vimu3g00026 3 186772 195135 ECH