Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g03214 ACTGTTACCTTCTCTTTCCAACATATTAGAGAGAGTTTGAAAGAGAAGATGAATTTCAACCAAACCATCTTCTCTTCGGCCACGCTGCTGGTCAGCATCCCTCTCTCACGACGTGAGATCTACAACGTGTGCATGGATCAGCCCATGAAGATTATCTCCGATGGCATTTGGAACCACCCCAATGGTTCATCGCCCACACAATCTGCATACACCATGCTTCAGATTCAAATGGTTATAATCTTTGCAATCACTCAAGCCTTTCATTTCATTCTCAAGCAATTTGGGTTCCCCTATTTCGTTTCACAAGTCATGACTGGTTTTCTGCTAGGGCCAACAATTCCGACAGGACCATTCGAAAAGTACAAGAAGATGTTGTTCCCTTTTGGGAGTGCTGATATCCTGAACACGGTGTCATCGTTAGGGTTCTCATTCTTCCTCTTCATAACCTCAGTGCAAATGGACCTGAGTTTGATCACGAAAACGGGGAAGAAGGCATGGGTCATGGCACTTTCCTCCTACTTCGTCTCCATAGCTATTGGGTTTTCCGTCATGAACTTGTTGTCTTCCCAGCTGGAACAAATAAATGATGATTATGACAGTTTCTCGAGCTTGCCAATGGTCATAGTAACTCAGGGCGGCGTTTCCTTCGCCGTCGTCTCGACCTTGCTCAACGACCTCGGAATTCTCAACTCCGAACTCGGTCGCCTTGCCCTCTCCACAGCTTTCGTCAATGACTTAACTGGTGGAATTGCAGCAGGGTTCGGCGCAGACTATGTGAAAAGCGTGCAGTTGGGATTTCCTATTCTAGTCACAAACGTGGTGGCTTTTTTTGTTTACCTAATCTGCATTCCACTGATTGGGCGACCGGCGATGAAGTGGATTGTGAAGAACACCCCAGAAGGGAAACCCGTGAGCAAGATATATATCTATTCCATCATAGTGTCGTTTCTGGGATTAGGGTTCTTCGCAGGGTATTTCAACCAACCTTTCTTAGTAGGGGCTATTATTTTAGGCCTTGCAGTCCCCGAAGGTCCACCATTGGGGTCAGAATTGGTTTCCCAACTTGAGTTGTTTTGCAGTTGGTTCCTCACCTCAATTTTTGTCACATGTTGCACCATGAAGGTGGATCTCAAAGCCTGTGTACCTTTATCCTTCTTTGTGGTCGTGTTCCTCTTCATTCTATTAGTCCAATTGATTAAGATACTATTGTGCATGGGAATTTGCCGCTACTGTAAAATGCCCTACTCTGATGGTTTCTGCCTTGCTCTCATTTTGAGCAGCAAAGGTGTTGTGGATGTCTGCTCCTATGTCCTCATGTTCGATTCAATGGCACAAAACAAACAAGTAATAGGGGTTTTGATCGTGTCGGTGTTGGTTCTGGGAACAACTTCGAAGATTGGTGTGAAAGCACTGTATGACCCTTCAAGGAAATACGCAGGGTATCAAAAAAGGAACATCATGAGCTTGAAGCAAAATCATGAGCTTAGGATTGTTGCATGCATCCAGAAGACATACCAAGTGATTCACATGAAAAACGTGCTCCAGCTGTGTTCTCCTTGTCCAGAGAGCACACTGGTGGCAGATATTCTGCATCTGATGGAGCTGGTTGGAAGGTCCACTCCCATTTTCATTGCACACAGACTTCAGCAAAAGGTGGGGTCCTCCTACAACTACTCCGGGGAACTAATCGTGACCTTTGACCTTTTTGAACGTGACTATGCGGGTTGTGCCACCGCCAACACCTACACTGCCATATCCCCAATGGCACTGATGCATGAAGATGTGTGTCACCTTGCACTGGACAAAAACGCAGCCATTATAATCCTTCCATTTCATCTGAAATGGGGAGGGGATGGTTCGATTGAGTTAGAGGACAGCAACATAAGGTCATTTAACTCAAGGGTTTTGGAAAGGGCACCTTGCTCCATTGGGATTCTTGTGAGCCGTGGCCCCGCTGGGTTCAGCGCAGCAAATTACAAAGTGGCCATGGTTTTCTTGGGAGGAGCAGATGACAGAGAGGCCTTGTGCTTGGCTAAGAGGTTCACCAAAAACCTTGGCAACAGGTTGTTTGTGTATAGGTTGGTTGCATACGATCGTGATATGTCGAATTGGGAAGACATGATTGATGATGAGGAGTTGAGGGAGGTGCGTGGAGCCTATGGAAAACTTGAAAATGTTACATACGAAGAGCACACCATAGAAGATGCATCTCAGACAACGGTTTTCATCAAAGACATAGCCAACAAATTTGATTTTATCGTGGTTGGAAGACGCTACGGAATGAGATCTTCTCAAACCTATGGGTTGGAAAATTGGACTGAATATTCGGAGTTGGGAGTCATCGGTGATTTGCTCGCTTCACCTGATATGGAAACTAGGGCATCTGTTTTGGTTGTACAACAACAGTCAACGGCTGCCTCATGA 2424 0.4575 TVTFSFQHIRESLKEKMNFNQTIFSSATLLVSIPLSRREIYNVCMDQPMKIISDGIWNHPNGSSPTQSAYTMLQIQMVIIFAITQAFHFILKQFGFPYFVSQVMTGFLLGPTIPTGPFEKYKKMLFPFGSADILNTVSSLGFSFFLFITSVQMDLSLITKTGKKAWVMALSSYFVSIAIGFSVMNLLSSQLEQINDDYDSFSSLPMVIVTQGGVSFAVVSTLLNDLGILNSELGRLALSTAFVNDLTGGIAAGFGADYVKSVQLGFPILVTNVVAFFVYLICIPLIGRPAMKWIVKNTPEGKPVSKIYIYSIIVSFLGLGFFAGYFNQPFLVGAIILGLAVPEGPPLGSELVSQLELFCSWFLTSIFVTCCTMKVDLKACVPLSFFVVVFLFILLVQLIKILLCMGICRYCKMPYSDGFCLALILSSKGVVDVCSYVLMFDSMAQNKQVIGVLIVSVLVLGTTSKIGVKALYDPSRKYAGYQKRNIMSLKQNHELRIVACIQKTYQVIHMKNVLQLCSPCPESTLVADILHLMELVGRSTPIFIAHRLQQKVGSSYNYSGELIVTFDLFERDYAGCATANTYTAISPMALMHEDVCHLALDKNAAIIILPFHLKWGGDGSIELEDSNIRSFNSRVLERAPCSIGILVSRGPAGFSAANYKVAMVFLGGADDREALCLAKRFTKNLGNRLFVYRLVAYDRDMSNWEDMIDDEELREVRGAYGKLENVTYEEHTIEDASQTTVFIKDIANKFDFIVVGRRYGMRSSQTYGLENWTEYSELGVIGDLLASPDMETRASVLVVQQQSTAAS 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g03214 807 Gene3D - 71 479 IPR038770 -
Vimu2g03214 807 PANTHER CATION/H + ANTIPORTER 44 803 - -
Vimu2g03214 807 Pfam Sodium/hydrogen exchanger family 80 459 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g03214 Vimu-Chr2 39481414 39484587 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g03214 38 802 Antiporter Super Family AT5G22900 34.559 1.41e-150 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g03214 K26731 - gmx:100797272 1191.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g03214 2 39481414 39484587 Vimu2g03214 2 39481414 39484587 ECH