Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g03208 ATGGATGCGAATCAGACACTCTTCTCTTCAGTGACGTTATTGCACGAAGTGCCATCGTTGGGATTTGAGGTCTACAATGTGTGCGTGAATCATCCAATGAAGATAATATCCGATGGCATATGGACACAACATGGAAGTGCATTACCTACACAGTATTCATACACCATGCTTGAGCTTCAAATACTTATCATCTTCGTGGATTTGAGATCAAAGTTTTGTTTTTCAGACAGGGTTTCTGATGGGGCCATCAGTTCCGACAGGACCATTGGAAAAGTACAAGAAGATGCTGTTCCCGTTCGGGAGTCCAGACATCCTAAGCACACTATCATCGTTGGGGTACTCCTTCTACCTGTTCCTGAACTCAGTGCAGATGGACCTAAGCTTGATCACGAAAACAGGGAGAAAGGCTTGGGTGATAGGGCTTTGCTGCTATGGCATTCCCATAGTGGTGGGGTGTGGGAGCATGGGAGGATCCTGGGAGAGGACATTTCTGCTTTGCCTGTGGTCTTCATATCTCACAGTAGTTGCTCCTTCGCTGTCATTTCATGGTTGCTCAATGACCTCGGAATCCTCAACTCCGAACTCGGTCGCCTCGCACTCTCAGCAGCTTTTGTTAACGATGTTGCAGGGATTGGTGCTGCATATTTCGGGAGACAGAACATGAGCATGTCTATCCGTATTAGAAACGTTACGGCATTTCTTGCTTACGCAATCTTCATTCTTCTCATTGGTCGTCCTGCGATGAGGTGGATCGTGAAGAGGACCCCAGAAGGTAGATCGGTTAACAAGGGATACATCTACGCCATCATAGTAGTGTTCTTGGGATTGGGCTACTTTGCCAAGTTTTTCGGTGAACCCTTCTTAGTAGGAGCTGTTATTTTTGGACTTGCAGTCCCTGAGGGTCCTCCTCTGGGTTCTGCACTCGTTACCCAACTTGAGTTGTTCTCCAAGTGGTTCCTCTGCTCCATTTTTGTCACATGTGTCACCATGAAGGTGGATCTCACCAAATGTAACTCTCTCTCTTTCGTAATTGTCATTTCTGGTGTCATCATTATGGTGCACCTGGTTAGGTGGCTTTTGTGCATGGGAATTTGCCGATACTGCAAGATTCCCTTCAAGGATGGCTTTTGTCTTGCTCTCATTTTGAGCTGCAAAGGGGTTGTTGATATCTGCTCCTATCTCCTAGTCTACGATGCCATGGTACAAAAGAGAACAGTAGTAGATGTTATGATCGTCTCAGTGTTGGTCCTAGGTACGGCTTCGAGGTTTGGTGTGAAGGCATTGTATGACCCTTCAAGGAAATACGCAGGGTACCAGCATAGGAACATCATGAGCTTGAAACACAGTGAGCTTCGGATAGTTGCATGCATCCACAAGCCATGGCACTCGGTTCACATCAAGAACGTGCTCGAATTTTGCTCCCCGGCACCAGATAACACACTGGTAGCAGAAATTTTGCACCTCATGGAGCTAGTTGGAAGGTCCAATCCCATTTTCATTGCACACAAACTTCAGCAAAGTGCAGCATCATCATCCTACAACTACTCTGGGGAACTCATTGTAGCCTTTGACCTTTTCGAACGTGACTATCTTGGTGCTGTCACTGCCAACACCTACACTGCCATATCCCCGGTGATGTTCATGAATGAAGATGTGTGCAACCTTGCTTTGGACAAAAATGCAGCCCTTATAGTCCTTCCATTCCATGTGAAATGGGGAGGGGATGGTTCAGTTGAGTCAGAGGATAGCAACATAAGGGCGCTTAATGCCAGGATTTTAGAAAGGGCACCTTGCTCTGTTGGGATTCTTGTGAACCGTGGCCCTAGCTTCAACTCAAGAAGAATCAGAGCGGCCATGGTTTTCTTGGGGGGACCTGATGATAGAGAGGCGTTGTGCTTGGCTAAGAGGTTTGTGAAAGATGTTGATAATAGTTTGGTTGTGTTCAGGTTGTTGGCACACGACAAAGATACCTCCAATTGGGATCACATGATTGATGATGAAGCGATGAGGGAAATAAGTGGAGTTCATGTTAATCTAGAAAATGTTAGATATGAAGAAATTACTATAGGAGATGCATCCCAGACAACGTTTCTCATCAAAGATATAGCCAACAAATTTGATTTTATTGTAGTTGGTAGACGCTATGGGGTCAGATCTTCTCAGACCTATGGCTTGGAGCATTGGACTGAATATTCAGAGTTAGGGGTAATTGGTGATTTGCTTGCTTCACATGATACAGATACTACGGCTTCAGTTTTGGTTGTGCAACAACAACCATCTCATGAAGACCACAGATAA 2298 0.4552 MDANQTLFSSVTLLHEVPSLGFEVYNVCVNHPMKIISDGIWTQHGSALPTQYSYTMLELQILIIFVDLRSKFCFSDRVSDGAISSDRTIGKVQEDAVPVRESRHPKHTIIVGVLLLPVPELSADGPKLDHENREKGLGDRALLLWHSHSGGVWEHGRILGEDISALPVVFISHSSCSFAVISWLLNDLGILNSELGRLALSAAFVNDVAGIGAAYFGRQNMSMSIRIRNVTAFLAYAIFILLIGRPAMRWIVKRTPEGRSVNKGYIYAIIVVFLGLGYFAKFFGEPFLVGAVIFGLAVPEGPPLGSALVTQLELFSKWFLCSIFVTCVTMKVDLTKCNSLSFVIVISGVIIMVHLVRWLLCMGICRYCKIPFKDGFCLALILSCKGVVDICSYLLVYDAMVQKRTVVDVMIVSVLVLGTASRFGVKALYDPSRKYAGYQHRNIMSLKHSELRIVACIHKPWHSVHIKNVLEFCSPAPDNTLVAEILHLMELVGRSNPIFIAHKLQQSAASSSYNYSGELIVAFDLFERDYLGAVTANTYTAISPVMFMNEDVCNLALDKNAALIVLPFHVKWGGDGSVESEDSNIRALNARILERAPCSVGILVNRGPSFNSRRIRAAMVFLGGPDDREALCLAKRFVKDVDNSLVVFRLLAHDKDTSNWDHMIDDEAMREISGVHVNLENVRYEEITIGDASQTTFLIKDIANKFDFIVVGRRYGVRSSQTYGLEHWTEYSELGVIGDLLASHDTDTTASVLVVQQQPSHEDHR 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g03208 765 PANTHER CATION/H + ANTIPORTER 163 758 - -
Vimu2g03208 765 Pfam Sodium/hydrogen exchanger family 173 416 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu2g03208 765 Gene3D - 148 436 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g03208 Vimu-Chr2 39068419 39072149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g03208 160 755 Antiporter Super Family AT3G44900 37.754 3.23e-124 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g03208 K26731 - gmx:100797272 873.618