Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g03194 ATGCTAAAACCGGTATACAAGTTTGGACAAACTTCCTTTTCAATTTCTTTTTCTTGGAATACTTTCTCTTATTTGATATGCGATTTCTTTCTTTTTCTCGATCTCCTTCTCCCTCGTTCGTCTTCCTTCGTTGTCATTCGTTTCGGTTGCCATTGCGGCCACCTCCTCAACTGGCTCCACGTCGTCCGCAACATCGCCCGCGTCCGTAACATCGCTCGCGTCCCCGGCGATAACCTCGATCCTAGCTTCGATCCTCTCTTACCTAAGCCAAATAGCGGTGACATCGAATTCGAAAACAAAGAAGAAAGAACTCTCGTCTTGGTGCAGCGCCAGATCTATCGCAAGGCCGACGGAGATGGCGACGTTCTTAGTCCCGTTCTGTATCGCGACAAACTCGCAAGGACGTTCAACTCGTACGGATTCGTGAAGTTTCGCAACCTCGAGAAGATTTCGAAGCCGAACAGGAATAAGAAGAGGAAGGAGGGGATGGAAGTGGAAGACGTGGAGGGGCTCAACGAGGTTGCTGTTTCTGGACGAACGCTTCGCGGTCGCGGTGTGGAGGAGTTGCCTGAGGAAATTAAGTTTATTGATGTTGCTGCTCATCCACCGGGCTCTTCTTATCACAAAAGGGGTGTCCCACTTACTCGGAGAGCCAGTGGTGGATTCATTGCTCCATTTATCTACCCAGAGCTTGAGTGGGGTTTCCGATTACCACTAGTGAAGAGCATCAATGTTAGTGGACACAAGTATGGTTTGGTGTATGCTGGAATCGATTGGGTTATCTGGCGGAGCAAGGAGGACCTGCCTGAAGAACTCATCTTCCATATCAACTATCTCGGAGCTGATCAACCCACCTTCACACTTAACTTCTCCAAAGGTTCCAGCCAAGTCATTGCTCAATACTACCAACTAATTCGCCTTGGTTTTGAGAAACGTGATGGAAAATTGCAGAGACAACATGTTGATGCTGAAAGAGGGACTGAGAAGACATGGCGGTTTGCCATTGTGTCCAAAGACAATGGTGTGCCTTTGGTTGCTTTCACCCGGAAAGACCACACTCACTCTGACGAGTTTCAAATCTCTGACCTGCTGAGAAGTTCAAAAAGTATATAG 1113 0.4798 MLKPVYKFGQTSFSISFSWNTFSYLICDFFLFLDLLLPRSSSFVVIRFGCHCGHLLNWLHVVRNIARVRNIARVPGDNLDPSFDPLLPKPNSGDIEFENKEERTLVLVQRQIYRKADGDGDVLSPVLYRDKLARTFNSYGFVKFRNLEKISKPNRNKKRKEGMEVEDVEGLNEVAVSGRTLRGRGVEELPEEIKFIDVAAHPPGSSYHKRGVPLTRRASGGFIAPFIYPELEWGFRLPLVKSINVSGHKYGLVYAGIDWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEKRDGKLQRQHVDAERGTEKTWRFAIVSKDNGVPLVAFTRKDHTHSDEFQISDLLRSSKSI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g03194 370 SUPERFAMILY PLP-dependent transferases 218 367 IPR015424 -
Vimu2g03194 370 Pfam Pyridoxal-dependent decarboxylase conserved domain 218 348 IPR002129 GO:0016830|GO:0019752|GO:0030170
Vimu2g03194 370 PANTHER GLUTAMATE DECARBOXYLASE 217 367 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vimu2g03194 370 Gene3D - 217 329 IPR015421 GO:0003824
Vimu2g03194 370 Gene3D - 331 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g03194 Vimu-Chr2 38265097 38268139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g03194 218 365 Calmodulin-binding Proteins AT1G65960 75.497 1.45e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g03194 K01580 - gmx:100796533 247.669