Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g03177 GGTAACAAATATAAAGGTGGCATCTATATGGTCTTTGAATACATGGACCATGATTTGACTGGTCTTGCTGACAGACCAGGGATGAGATTCACAGTGCCCCAAATTAAGTGCTACATGCGACAGCTTCTAACTGGGCTGCATTATTGTCATGTAAATCAAGTACTTCACCGTGATATCAAAGGTTCAAATCTTCTCATAGATAATGAAGGTAATCTGAAACTTGCTGATTTTGGATTGGCACGGTCATTTTCTAATGAGCACAATGCAAATCTTACTAATCGTGTCATCACATTATGGTACAGACCCCCTGAGCTGCTGCTTGGGACAACGAGGTATGGGCCGGCTGTAGACATGTGGTCTGTGGGGTGCATCTTCGCAGAGCTTCTTCATGGGAAGCCTATATTTCCTGGAAAAGATGAGGTTAGTGATAAAATACTAGTGTGA 444 0.4257 GNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNEHNANLTNRVITLWYRPPELLLGTTRYGPAVDMWSVGCIFAELLHGKPIFPGKDEVSDKILV 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g03177 147 ProSiteProfiles Protein kinase domain profile. 1 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu2g03177 147 PANTHER CELL DIVISION PROTEIN KINASE 7 142 - -
Vimu2g03177 147 SMART serkin_6 4 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu2g03177 147 FunFam Mitogen-activated protein kinase 15 146 - -
Vimu2g03177 147 SUPERFAMILY Protein kinase-like (PK-like) 5 142 IPR011009 -
Vimu2g03177 147 Gene3D Transferase(Phosphotransferase) domain 1 15 142 - -
Vimu2g03177 147 ProSitePatterns Serine/Threonine protein kinases active-site signature. 54 66 IPR008271 GO:0004672|GO:0006468
Vimu2g03177 147 Pfam Protein kinase domain 7 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g03177 Vimu-Chr2 37769255 37769990 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g03177 2 140 Core Cell Cycle Gene Families AT5G10270 90.647 8.36e-93 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Vimu2g03177 Pkinase 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g03177 K08819 - gmx:100793565 299.286