Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g03163 ATGATGACTATTATGGCTGAAAATAAAGTAGAAGATGCAGCTGTTTGGAGTAGCGAAAAATTCATCCAAAAATTCAAGATATGGTTGTCACAATCATATAAAACACCAGAAGACCAATGGCAGGGAAATTTCTTTGCAGGGCTGCAATACAACATTCAGAGGAAACAATATGCTCAACATGATGATGATGAAGAAATTGGATGGTCAGATCAACAAGCTCTTTCCTTTTTAGCTTCTAGGATGAACAAATTTGGACAAGGAGAGGACTTAGCCAGTGCTGCTGCTACAAAAATACAAAAAAGGCTTTGGAGTTGGAAGAGGAGAAAAGAATTCTTGATCATTCATCAGAGAATTGTTAAAATCCAGGCCCATGTAAGTGGTCACAAGGTCGGAAGGCAATATAGAACAATCATATGGTCCATGGGAATTTTGGAAAAGAAGCAACTCTTAAAAGAGTCAACAATTCTTTCATATAGACCACCACCCAAGCCTCCAGACCTGGATTGGAGGACAAAAGCCAGTGGGTTCCCTTCCTAA 537 0.3929 MMTIMAENKVEDAAVWSSEKFIQKFKIWLSQSYKTPEDQWQGNFFAGLQYNIQRKQYAQHDDDEEIGWSDQQALSFLASRMNKFGQGEDLASAAATKIQKRLWSWKRRKEFLIIHQRIVKIQAHVSGHKVGRQYRTIIWSMGILEKKQLLKESTILSYRPPPKPPDLDWRTKASGFPS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g03163 178 Gene3D - 90 138 - -
Vimu2g03163 178 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 52 148 - -
Vimu2g03163 178 MobiDBLite consensus disorder prediction 159 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g03163 Vimu-Chr2 37372272 37373122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g03163 51 146 CAMTA Transcription Factor Family AT5G09410 60.417 2.00e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g03163 K21596 - gmx:100818124 129.413