Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g03145 ATGAATGGGCAGAAAATTAAGCGCCGAGTGGGTAAATATGAGGTAGGGAGGACCATTGGGGAGGGAACATTTGCAAAGGTGAAATTTGCTAGGAACTCTGAGACTGGGGAGCCCGTGGCTCTTAAGATTATTGATAAGGAGAAGGTTCTCAAGTATACGCAAGCTGAGCAGGTACTTCAAGAAATTTTCTTTGACATCTCTTGTTCTACCTTCCCATGTACTATTAAGGCATACATTTTTATGTCTAATTGGGCCTCACTTGGGGAAGTAAAATCTCGATGTTTTCTCGATGTATTTTCACATATCCAGCGAGAAATAGCCACAACGAAGTTGATCAAGCATCCAAATGTTGAACGGATAAACTTTGACTCAAATGTGGCTGATGGAAAGAGTGATCAACTCTGTTATGAACTCAATTTACTGGCCTATTGCATCATGCAAGATTTCATCTCATTTGCAGGTCATGGGGAGCAAGACAAAAATATACATTATTTTAGAGTTTGTGACTGGGGAGAACTTTTTCATAAAATTTCCGTAAGTTGCAATTTTGTTGAAGTGGAAAAACTGTTTGTTAAATGTATTTTTTTTCTTGTGAAGTTAAACAGTGGATGGATGAGTGAAAAGGAAGCACGCAGATATTTCCAGCAGCTTATAAATGCGGTTGACTATTGGCATAGCAGGGGTGTCTACTACAGAGACCTGAAACTAGAGAACTTACTATTAGATGCTTTTGGGAACCTTAAAATTTCTGATTTTGGATTGAGTGCACTTTCCCAACAAGTCAGGGATGATGGACTGCTCCATACAACATGTGGAACTCCAAACTATGTTGCTCCTGAGGTTCAGACAAATTATATGCTAAATACAAAATTTCTACATTTAAAATCATTCCTGCTACTTGCCTTTTGA 909 0.3861 MNGQKIKRRVGKYEVGRTIGEGTFAKVKFARNSETGEPVALKIIDKEKVLKYTQAEQVLQEIFFDISCSTFPCTIKAYIFMSNWASLGEVKSRCFLDVFSHIQREIATTKLIKHPNVERINFDSNVADGKSDQLCYELNLLAYCIMQDFISFAGHGEQDKNIHYFRVCDWGELFHKISVSCNFVEVEKLFVKCIFFLVKLNSGWMSEKEARRYFQQLINAVDYWHSRGVYYRDLKLENLLLDAFGNLKISDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVQTNYMLNTKFLHLKSFLLLAF 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g03145 302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Vimu2g03145 302 SMART serkin_6 13 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu2g03145 302 SUPERFAMILY Protein kinase-like (PK-like) 9 289 IPR011009 -
Vimu2g03145 302 Gene3D Transferase(Phosphotransferase) domain 1 89 290 - -
Vimu2g03145 302 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 283 - -
Vimu2g03145 302 ProSiteProfiles Protein kinase domain profile. 13 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu2g03145 302 Pfam Protein kinase domain 132 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu2g03145 302 Gene3D Phosphorylase Kinase; domain 1 4 83 - -
Vimu2g03145 302 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g03145 Vimu-Chr2 36875030 36878479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g03145 4 281 CBL-interacting serine-threonine protein kinases AT2G26980 50.719 2.67e-75 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vimu2g03145 Pkinase 4.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g03145 - - fve:101298966 235.343