Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu2g03113 | ATGAAAAAATATGCATACACATTGAAAGTGGATGAGAAAAGTGATGTTTACAGCTTTGGAGTGGTGCTGCTAGAGCTCATAACAGGGAGAAGACCAGTGGGGAACTTTGGGGAAGATGGATTAGACATTGTTCAATGGATCATGATGCAAACAAATGGGAACAAAGAGATGGTGATGAAGATCCTTGATGAGAGGCTACATCACATTCCTTTGACTGAAGCAAAGCAGGTGTTTTTTGTGGCAAAGTTGTGTGTTCATGAACACAGTGTGGAAAGACCAACCATGAGAGAAGTGGTTGAAATGCTTGCACAAGCAAAACAACCAAATACATTTCGAATGCAGTGA | 345 | 0.4087 | MKKYAYTLKVDEKSDVYSFGVVLLELITGRRPVGNFGEDGLDIVQWIMMQTNGNKEMVMKILDERLHHIPLTEAKQVFFVAKLCVHEHSVERPTMREVVEMLAQAKQPNTFRMQ | 114 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu2g03113 | 114 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 113 | - | - | |
Vimu2g03113 | 114 | Pfam | Protein tyrosine and serine/threonine kinase | 9 | 102 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu2g03113 | 114 | ProSiteProfiles | Protein kinase domain profile. | 1 | 110 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu2g03113 | 114 | PANTHER | OS01G0253100 PROTEIN | 3 | 107 | - | - | |
Vimu2g03113 | 114 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 106 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu2g03113 | Vimu-Chr2 | 34867508 | 34869038 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu2g03113 | 3 | 104 | Receptor kinase-like Gene Family | AT5G65700 | 67.647 | 5.12e-44 | 150 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Vimu2g03113 | PK_Tyr_Ser-Thr | 3.1e-10 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu2g03113 | - | - | gmx:100815103 | 202.986 |