Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g03105 CGTCCGGGCCTCGGCGACATTCCAAAGAGCTGCGTGGCATGCGTGTTCCTCTATCTCACATCATCGAAGATTTGTAACCTCGCTCTCTTTAATCTCGCGTTTCGCAGCGCCGCCTCCTCTGACTCAGTTTGGGAGGCCAAGCTGCCGCGCAACTACCAGGAACTGCTGGATCTGGTCCTGCCGGAGCGCCACCGGAATCTCTCGAAGAAGGACATTTTCGCGCTCCTCTCACGACCCTTGCCCTTCGATGATGGCCACAAGGTGGGTGGTGCTCTCCAGGTCAGAGTTTTGCAAGAAGTGTGGCTGGACAGAGTCACGGGAAGGGTTTGCATGTTGATTTCGGCGTGGGCGATGGCGATTACTGGAATGGATGAGTGCTTGCAGTTTTCTCGGCTGTTTCTAGATTGGAGCTTTCAATGTCCAAGGAGACGCACGCATGTAAATGTTGAAGATCCAGCTTCATGCATCATATTGATAGGGTTGTTTGCTCTTCAGCATTATGGCACGCACAGAGTTGGCTTCTTGTTTGCTCCTGAGCAGAAGCCATGTTTGCTGATCTTGGGCACTTTAGCCAATTATCAATCA 585 0.5231 RPGLGDIPKSCVACVFLYLTSSKICNLALFNLAFRSAASSDSVWEAKLPRNYQELLDLVLPERHRNLSKKDIFALLSRPLPFDDGHKVGGALQVRVLQEVWLDRVTGRVCMLISAWAMAITGMDECLQFSRLFLDWSFQCPRRRTHVNVEDPASCIILIGLFALQHYGTHRVGFLFAPEQKPCLLILGTLANYQS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g03105 195 PANTHER F-BOX PROTEIN PP2-A15 2 126 - -
Vimu2g03105 195 SUPERFAMILY F-box domain 2 73 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g03105 Vimu-Chr2 34523294 34524514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g03105 143 178 Inorganic Solute Cotransporters AT1G70300 75.000 1.63e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g03105 - - gmx:100775493 184.111