Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g03048 AAAATGTGTTCTGAAAATGGAGATTTCTCTGTGAGTGTGACGAACGAAGAGGTGGTGGCAGCAGTATTACCAATGCAAGAACATTGGCTTCCACTCTCGAACCTTGACCTGCTTCTACCTCCATTGGATGTAGGAGTATTCTTTTGTTACAAGAACCCTATTATCACATCCACAACCATGGAAGACTGTGCCACCAACAAAATCACCTTTGGAACCATGGTGGCGTCTTTGAAGAAGGCCTTGGCACAGACCCTAATCTCTTATTATGTGTTTGCAGGTGAAGTCGTGCTCAACAGCATGGGTGAACCTGAAGTTCTCTGTAACAATCGTGGTGTTGATTTTGTTGAAGCTGAGGCAGATGTTGAACTTAAGAACCTCAACTTTTACAATCCAGACCAATCTATTGAAGGCAAGTTTGTTCCAAAGAAGAAGAATGGTGTGCTTGTTGTACAGACAACCGCACTTAAGTGTGGAGGAATAATAGTGGCATGTACATTTGATCATCGCATAGCAGATGCATATTCAACAAACATGTTTCTTGTTTCATGGGCTACCATGGCCCATCCCACAACCACCATTCTCGCAACCACTTCCTGCCATCCATGTTTTCGTCGCTCTCTTCTCAGCCCTCGTCGTCCAGGTTCCATCCACCCTTCTTTGCACCAAATGTACACTTCTATCTCCCATCTCCCTGCCCCTTCCACCACCACCACCACTCTTCTTAGTCGGATATATTTCGTCACGGCAGAGCAACTTCACTACATGCAGTCCCTCGCCGCCACCCGCACGAAGTTGGAGTGTTTCTCAGCTTTATTGTGGAAGATGGTTGCATGTGCAGCTTCAAGAGACACAAATAGTAAAAGGGTTACTGTCAAAATGGGCATTGTGATTGATGGAAGGAAGAGACTAGGTAATGGTGACAAAAACAGTGAAGCAATGATGGAGTGTTACTTTGGGAACATGCTTTCCATACCCTTTGGAGAGAAACTAGTTGAGGAGTTGGTGAAGGAGCCATTAGAGTATGTGGTTGAGGCTGTTCACGAGTTTTTGTCCGTGACCGCCACGGAGGAGCACTTCTTAGGACTAATTGATTGGATGGAGGCTCAGAGGCCGATTCCTGGAGTGTCAAGAATTTATTGTAACCGTGCTGACGAGGGACCAGCCTTTGTGGTGTCGTCCGGTCAGAGGTTTCCGGAGGGGAAGGTGGATTTTGGGTGGGGGAAAGCGATGTTTGCATCGTACCATTTTCCTTGGGGTGGTGAAGCTGGTTATGTTATGCCAATGCCAAGTCCTTTGGGGAATGGTGATTGGGTTGTGTACATGCACCTTGCAAAGAAGTACTTGGACATCATAGAGACTGAAGCTGCTCATGTGATTAAGCCTTTGACTTGGGATTACCTTAACAAATAA 1410 0.461 KMCSENGDFSVSVTNEEVVAAVLPMQEHWLPLSNLDLLLPPLDVGVFFCYKNPIITSTTMEDCATNKITFGTMVASLKKALAQTLISYYVFAGEVVLNSMGEPEVLCNNRGVDFVEAEADVELKNLNFYNPDQSIEGKFVPKKKNGVLVVQTTALKCGGIIVACTFDHRIADAYSTNMFLVSWATMAHPTTTILATTSCHPCFRRSLLSPRRPGSIHPSLHQMYTSISHLPAPSTTTTTLLSRIYFVTAEQLHYMQSLAATRTKLECFSALLWKMVACAASRDTNSKRVTVKMGIVIDGRKRLGNGDKNSEAMMECYFGNMLSIPFGEKLVEELVKEPLEYVVEAVHEFLSVTATEEHFLGLIDWMEAQRPIPGVSRIYCNRADEGPAFVVSSGQRFPEGKVDFGWGKAMFASYHFPWGGEAGYVMPMPSPLGNGDWVVYMHLAKKYLDIIETEAAHVIKPLTWDYLNK 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g03048 469 Pfam Transferase family 10 456 - -
Vimu2g03048 469 Gene3D - 225 453 IPR023213 -
Vimu2g03048 469 Gene3D - 8 224 IPR023213 -
Vimu2g03048 469 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g03048 Vimu-Chr2 32098159 32101819 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g03048 33 452 Monolignol Biosynthesis Gene Families AT5G48930 24.153 1.28e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g03048 - - gmx:100785067 714.146