Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g03046 ATGCAAGAACATTGGCTTCCACTCTCGAACCTTGACCTGCTTCTACCTCCATTGGATGTAGGAGTATTCTTTTGTTACAAGAACCCTATTATCACATCCACAACCATGGAAGACTGTGCCACCAACAAAATCACCTTTGGAACCATGGTGGCGTCTTTGAAGAAGGCCTTGGCACAGACCCTAATCTCTTATTATGTGTTTGCAGGTGAAGTCGTGCTCAACAGCATGGGTGAACCTGAAGTTCTCTGTAACAATCGTGGTGTTGATTTTGTTGAAGCTGAGGCAGATGTTGAACTTAAGAACCTCAACTTTTACAATCCAGACCAATCTATTGAAGGCAAGTTTGTTCCAAAGAAGAAGAATGGTGTGCTTGTTGTACAGGCAACATCACTAAAGTGCGGTGGAATAGTTGTAGCATGTTCATTTGATCATCGCATTGCAGATGGGTATTCAGCGAACATGTTTCTGACTTCATGGGCCGATACGGCCCATCCCACCAATCCCATAACTGTGAGCCCATGTTTCCGTCGGTCCCTCCTCAGTCCTCGTCGTCCATGTTCTGTTCCTCCTTCCCTTCACCAAATGTACACCCCTAATTCGAAGTTCACCCCACCGCAAACCGCAACCGCCCCTCTCTTGAGTCGCATATACTACGTAACTGCTGAGAAACTTCACAGCATGCAAGCCCTTGCGAGTGGCAATGGTGGAAAACGTACGAAGCTTGAGTGTTTTTGTGCGTTGTTGTGGAAGATGGTTGCACGTGCGGCTTCAAGAGAGGGAAGGGGCAAAAGGGTGGTGGCGAAAGTGGGAGTCGTGGTTGATGGAAGGAGAAGACTGTGGAAAAGTGAGAAAGTGAAGGAAGCGTTGATGGGGAATTACTTCGGGAACGTTCTTTCGATACCCTTTGGAGAGAAGGTGGTGGAGGAGTTGATGGAGAAGCCGTTAGGGTTTGTGGCTGACGCGGTTCACGAGTTCTTGATGGAGGCGACGACGGAGGAGCATTTCTTGGGGCTGGTTGATTGGGTGGAGGGTCATAGACCAGAGGGAGGGTTGGCAAGGATTTACTGTAATGGAAGTGAAGGAGGGAGCTTTGTGGTGTCTTGTGGGCAAAGGTTTTTGGAGGGGAAGATGGATTTTGGGTGGGGGAAGGTTGTGTTTGGGTCATTCCATTTTCCCTGGGGTGGTGCAGCTGGTTATGTGATGCCAATGAAGAGCCCTCTAGGGAATGGTGATTGGGTTGTGTACATGCATCTTACCAAGGAGCAATTGGAAGTCATAGAATCTGAGGCTGGAGTCGATGGAGTTGCCGGCGGGGGACGAGGGCTGGAGGTCGTCACCGAAGAGAGAGTAGTCGAAGAAGGACTGGATGCCGTGGACGGCGAGGGAGGGGGTGGAGAAGAGGTCGGGGTGGGTGAAGGGGGTGTAGTCGAGGAGAAGTTGGCGGGGGAGTTGTTAGTTACAGAGATGGTTTTGGCGGTGAGGAGGGTAGGGAGGCGGGCGCGGTGGGGGAGGAGGAGGAGGTCGGAGAAGGGGAGGCACTGGGGACAACATGATAGGGAATAG 1563 0.5106 MQEHWLPLSNLDLLLPPLDVGVFFCYKNPIITSTTMEDCATNKITFGTMVASLKKALAQTLISYYVFAGEVVLNSMGEPEVLCNNRGVDFVEAEADVELKNLNFYNPDQSIEGKFVPKKKNGVLVVQATSLKCGGIVVACSFDHRIADGYSANMFLTSWADTAHPTNPITVSPCFRRSLLSPRRPCSVPPSLHQMYTPNSKFTPPQTATAPLLSRIYYVTAEKLHSMQALASGNGGKRTKLECFCALLWKMVARAASREGRGKRVVAKVGVVVDGRRRLWKSEKVKEALMGNYFGNVLSIPFGEKVVEELMEKPLGFVADAVHEFLMEATTEEHFLGLVDWVEGHRPEGGLARIYCNGSEGGSFVVSCGQRFLEGKMDFGWGKVVFGSFHFPWGGAAGYVMPMKSPLGNGDWVVYMHLTKEQLEVIESEAGVDGVAGGGRGLEVVTEERVVEEGLDAVDGEGGGGEEVGVGEGGVVEEKLAGELLVTEMVLAVRRVGRRARWGRRRRSEKGRHWGQHDRE 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g03046 520 Gene3D - 196 428 IPR023213 -
Vimu2g03046 520 Gene3D - 1 195 IPR023213 -
Vimu2g03046 520 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 404 - -
Vimu2g03046 520 Pfam Transferase family 2 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g03046 Vimu-Chr2 31978925 31983033 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g03046 9 427 Monolignol Biosynthesis Gene Families AT5G48930 25.576 6.26e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g03046 - - gmx:100777149 622.083