Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g03034 ATGACAAAGAAGCGGAAGCAGCGCCCTGTACCAGTGGAAGATCCTTCAACTGCTTCCTCCTCCGAATCTGAGGAAGATGATGACCGATCGCATTCTTCTCAACAGCATGCAGTAGCAGCAGCAGCAGCAGCACAGGTTTCTTCCTCTGAAAAGGAAGACGATTCTTCAGATGAAGAAGACGAGAAGCAACGTTCCATTCTCCCTGCTTCCTCCTCCGAATCTGAGGAAGATGATGACCGATCGCATTCTTCTCAACAGCATGCAGTAGCAGTAGCAGCAGCAGCACAGGTTTCTTCCTCTGAAAAGGAAGACGATTCTTCAGATGAAGAAAACGAGAAGCAACGTTCCATTCTCCCTGCTTCCTCCTCCGAATCTGAGGAAGATGATGACCAACCGCATTCTTCTCAACAGCATGCAGCAGCAGCAGCACAGGTTTCTTCCTCTGAAGAGGAAGACGATTCTTCAGATGAGGAAGACGAGAAGCAACTTTCCATTCTCCCTGCTTCTGCAAACCATCCCTCAAAGCCTCACCCCAAGTCCTCCTCCTCTGAATCCGATACTGACACCGAACGAGCTCGAGTCAAATCCAAACCTAAGCCCACGGACCTACCCCAGCCCAAGGTTCAGGCCCAGAGTTCCTCCACGCCGGTGAAGCTGGGATCCAAGCGCCCCGCCCACACAACTGAGCCGAAACGCACGAAAAAGAATCCAGATGATGCTCCTTTTCCTTCTGTTGCTAACGACGAAACTTCTGTTGTTAACGACGAAACTTCTGTTGCTAACGACGAAACGAAGGAGGACGGGAAGAAGAATTTCGACGGACAAGCGAAAGTGTTGTTCCAGAGGATCTGGAGCGAAGAAGACGAGCTCAGCATTCTAAAGGGCATACTTGAGTTCATCTCAAAGACCGGACAAGAACCTTATAAGTATGTTGACGCTTTCCACAACTTCATTAAGAAATCACTCCACGTGGAGGTTTCCGGCCATCAGCTGAAGGATAAGATTCGACGTATGAAGAAGAAGTTCGAGACTCATGAGGCGAAAAAGAAGAAAGGGATTGAGCCTCGGTTGTTGAGGCCTCACGACCGGGCCTTGTTTGAATTCTCTAAGAAGATTTGGGGTGAATGGCCCAACGGATTGGTGGAAAAGCCCAAGCCTCTTGCGAAGTACGTTACGAAGGCTCAAAAGGAATCTGAAGCCAAGGCTAAAGTTCTGTCGCTGCCATCAGTGCCTGAAAGTGGTGACGTTAGTTTTCTTTACAACAATATTTCTTGTTTTAAAGAGCTGGATGAGGATGAGATGAAGAGAGGACTTACTTTGATTGGAGAATCCAAGAGGAAAGAGTTAGAGAGAAAGTGGAAAGTGTTGCAATATTCTGAGATGGAACTTCTTGTTAATCGCTCTCTACTGATTGGGGAGCAGATTAAGAACATTCATTCTCATCCAGGCTTGGATGGGGATGATGGAATGAAGCATTTTGTGTTTTTGTGTTCACTGTCTAATGCAATGTCATGCAAATTTGCCTATGCTCCTTTGGTGCTTATCCTTCAAAGGAGTGTTTTCTATTGTTGCCTTCTTGCCCTTCAGCTACTCTGA 1596 0.4724 MTKKRKQRPVPVEDPSTASSSESEEDDDRSHSSQQHAVAAAAAAQVSSSEKEDDSSDEEDEKQRSILPASSSESEEDDDRSHSSQQHAVAVAAAAQVSSSEKEDDSSDEENEKQRSILPASSSESEEDDDQPHSSQQHAAAAAQVSSSEEEDDSSDEEDEKQLSILPASANHPSKPHPKSSSSESDTDTERARVKSKPKPTDLPQPKVQAQSSSTPVKLGSKRPAHTTEPKRTKKNPDDAPFPSVANDETSVVNDETSVANDETKEDGKKNFDGQAKVLFQRIWSEEDELSILKGILEFISKTGQEPYKYVDAFHNFIKKSLHVEVSGHQLKDKIRRMKKKFETHEAKKKKGIEPRLLRPHDRALFEFSKKIWGEWPNGLVEKPKPLAKYVTKAQKESEAKAKVLSLPSVPESGDVSFLYNNISCFKELDEDEMKRGLTLIGESKRKELERKWKVLQYSEMELLVNRSLLIGEQIKNIHSHPGLDGDDGMKHFVFLCSLSNAMSCKFAYAPLVLILQRSVFYCCLLALQLL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g03034 531 MobiDBLite consensus disorder prediction 224 238 - -
Vimu2g03034 531 Pfam Protein of unknown function, DUF573 280 374 IPR007592 GO:0006355
Vimu2g03034 531 MobiDBLite consensus disorder prediction 58 84 - -
Vimu2g03034 531 MobiDBLite consensus disorder prediction 205 221 - -
Vimu2g03034 531 PANTHER BNAANNG10740D PROTEIN-RELATED 97 473 IPR007592 GO:0006355
Vimu2g03034 531 MobiDBLite consensus disorder prediction 179 200 - -
Vimu2g03034 531 MobiDBLite consensus disorder prediction 1 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g03034 Vimu-Chr2 30796781 30805567 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g03034 280 473 GeBP Transcription Factor Family AT1G61730 33.962 1.91e-26 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vimu2g03034 DUF573 5.7e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g03034 - - vra:106779331 629.787