Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g03023 ATGGTGGTGAAGGTGTACGGTCCAATTTATGGATGCCCGAAAAGGGTGGTTGTGTGTCTGATTGAGAAGGAAATTGAGTTTGAAGCAGTGCATGTCGATCTCTTCAAGGGAGAGAATAAGGAACCCGAGTTCCTTAAGTTGCAGCCATTTGGATCACTTCCTGTTATTCAAGATGGTGATTATACTCTCTATGTGGTAGCTTTGGCTCTCACTAATGGTCATTCTCGCTCTTGTTGGTGGTCGTTCTCGCTCTCGCTCTTGCATAGGTCACTTTCGCTCGTGGTCACTCTTGCTCTTGCAAACCATGTGCATTCCGCATTCTCCGACCTGTTCGTCATCGGAGAGAAGTTTCGGACAAAACAAAAGCAAATTGTCGTAAAGTTAGCCACTCCGACCACCACCAAGACCATTGCTTTGAACGCGACCTACTTCTTCCGCGGGAAACCACCATCAAGGACGTTGCAGTTGACTAGAGCTTTGACAGACAAGTTTCGATGCCGAGGTTGTCGAGCAGGAGCAGCTATGCTGGAAGCTTCTTTTTGGGGACGACGTTTGATTGCAATTTTTCCAGCGGAATTAAGGAGGAAACATCTTACACTTTGA 603 0.4693 MVVKVYGPIYGCPKRVVVCLIEKEIEFEAVHVDLFKGENKEPEFLKLQPFGSLPVIQDGDYTLYVVALALTNGHSRSCWWSFSLSLLHRSLSLVVTLALANHVHSAFSDLFVIGEKFRTKQKQIVVKLATPTTTKTIALNATYFFRGKPPSRTLQLTRALTDKFRCRGCRAGAAMLEASFWGRRLIAIFPAELRRKHLTL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g03023 200 Gene3D Glutaredoxin 1 105 - -
Vimu2g03023 200 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 64 - -
Vimu2g03023 200 FunFam Glutathione S-transferase F2 2 67 - -
Vimu2g03023 200 Pfam Glutathione S-transferase, N-terminal domain 3 63 IPR004045 -
Vimu2g03023 200 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 111 IPR004045 -
Vimu2g03023 200 SUPERFAMILY Thioredoxin-like 3 63 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g03023 Vimu-Chr2 30370241 30373808 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g03023 1 64 Glutathione S-transferase Gene Family AT2G30860 56.250 7.94e-22 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g03023 K00799 - gmx:547589 127.487