Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g03022 ATGGGATACTTTGCAGAGAAGTATAAAGACCAAGGATCTGACTTGTTTGGAAAGACAATAGAACAAAAGGGTCTTGTGGAACAATGGCTTGAAGTGGAAGCTCATAACTTTCACCCACCAATCTACGACTTGGTTATCAATCTTTTGTTTGCCCCATTAATGGGTGCTCCCTCAGACCAAAAGGTGATAGAAGAGAGTGATAAAAAGCTTGAGAAGGTGCTTGATGTTTATGAGGAGAGGCTCTCAAAAAGCAAGTACTTGGCTGGTGATTTCTTCAGCCTTGCTGATCTTAGCCATCTCCCATTTGGTCATTATTTAGTGAACCAAACTGGAAGGGGGAATTTGGTGAGAGAGAGGACGCATGTGAGTGCTTGGTGGGATGATATCAGCAACAGACCATCTTGGAAGAAGGTTCTTCAGTTATACAAATACGCTGTTTAG 441 0.424 MGYFAEKYKDQGSDLFGKTIEQKGLVEQWLEVEAHNFHPPIYDLVINLLFAPLMGAPSDQKVIEESDKKLEKVLDVYEERLSKSKYLAGDFFSLADLSHLPFGHYLVNQTGRGNLVRERTHVSAWWDDISNRPSWKKVLQLYKYAV 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g03022 146 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 140 - -
Vimu2g03022 146 SUPERFAMILY GST C-terminal domain-like 12 140 IPR036282 -
Vimu2g03022 146 CDD GST_C_Phi 21 139 IPR034347 -
Vimu2g03022 146 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 19 146 IPR010987 -
Vimu2g03022 146 Gene3D - 17 139 - -
Vimu2g03022 146 Pfam Glutathione S-transferase, C-terminal domain 42 133 IPR004046 -
Vimu2g03022 146 FunFam Glutathione S-transferase F2 17 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g03022 Vimu-Chr2 30364998 30365613 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g03022 1 146 Glutathione S-transferase Gene Family AT2G30870 60.959 4.68e-65 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g03022 K00799 - gmx:100499911 280.796