Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02998 ATGGTGTCGTCCATGGAGTTCCTAAGGGTTGCAAATTGGGTCATGAACCAGGTGCTTGTTAAATCATGTTATGGAGTAGCAAGGAAAATTAAAAGCCATAGTTTTGATTGGGGTGATCTTTCATATAAACCATTGCAACAACCTTCCTCATTCCCTGATATTGTCAAGTGTGATTTGGAGGGTAGAGGGTCTCAAACCCTTGCTTGTGACTTCCACAAAGTCCTCTTAAGGACTCGTTCCTTCTTTCCCTATTTCATGCTGGTTGCCTTTGAAGGTGGAAGCATTTTCAGGGCATTTCTCTTGCTTTGTTCATGTCCTATACTGTGGATTCTGAACTATGAAATGAAGCTCAGACTCATGATCTTCATCTCCTTTTGTGGACTCAAAGTGAAGGAGATGGAGAACACTTCAAGGGCAGTATTACCAAAGTTTTACTTGGAGAACCTTAATCTTGAGGCTTATGAGGTAGTTGCTTCAGTAGGGTCCAGGGTTTTCTTCACCACTATGCCTAGAGTGATGGTGGAAGGGTTTCTGAAGGAGTATTTGAATGCTGATGCTGTTATAGCCACAGAGTTGCATACTTCTGGTTGTTATTTCACTGGTTTTCTCTCTAAGTCTGGTTTGCTTGTGAAGCACAGTGCCCTTATGGATTATTTTGGAGATACAAAACCTGACCTTGGCATTGGTAACACAAGCCTTCAAGATCAACTTTTTATTTCTCTTTGCAAGGAGGCTTATGTGGTGATGAATGAGGGAAAAGTGATGCCAAGGAACAAGTATCCAAAGTCCTTAGTATTTCATGATGGAAGACTTGCATTCTTGCCTACTCCTTCAGCAACTCTGTGTATGTTCATGTGGCTTCCAATTGGACTTGTGATGGCCATTTACAGAATATTTCTGGGTGTGTTCCTTTGTTGCAAATTCACAATGGCATTAGGCGCGTGGTGTGGGTTGAAATTGAATTTCAAAGACAATAACCAGAAAAAATCAGAGTCAGATAAAGGGGTGCTTTATGTTTGCACTCACAGGACTCTCTTGGATCCAATTTTTCTGAGCTCAGGTTTGGGGAGGCCTTTGACAGCAGTGACATACAGCTTAAGCAAGGTGTCTGAGTTTATAGCCCCTATTAGGACCATAAGACTGACAAGGGACAGAAAAGAAGATGGAGAAACTATGAAAAGGTTGCTTGGTGAAGGGGATTTGGTGGTCTTTCCTGAAGGAACAACTTGTAGGGAGCCCTATCTATTAAGGTTCAGTTCCTTGTTTGCTGAACTGGCTGATGAAATTGTGCCTGTGGCTGTGAATGTTCATCCGAGCATGTTCTATGGGACCACAGCAAGTGGCCTGAAGGTGTTGGATCCATTTTTCTTTTTCATGAACCCTAGCCCTAAATATGACATTGAGATCCTTGAAAAGGTACCTAGAGAACTCACTTGTGCTGGGGGAAGGTCAAGTCATGAAGTGGCAAATCACATACAGAAACAGTTGGGGTATGCTTTGGGATTTGAGTGCACCAACCTTACAAGGAGGGATAAATATATGATGCTGGCTGGTAACGAAGGGGTTGTTCAAGAAAACAAGGGCAGAAGATTCTGA 1596 0.4254 MVSSMEFLRVANWVMNQVLVKSCYGVARKIKSHSFDWGDLSYKPLQQPSSFPDIVKCDLEGRGSQTLACDFHKVLLRTRSFFPYFMLVAFEGGSIFRAFLLLCSCPILWILNYEMKLRLMIFISFCGLKVKEMENTSRAVLPKFYLENLNLEAYEVVASVGSRVFFTTMPRVMVEGFLKEYLNADAVIATELHTSGCYFTGFLSKSGLLVKHSALMDYFGDTKPDLGIGNTSLQDQLFISLCKEAYVVMNEGKVMPRNKYPKSLVFHDGRLAFLPTPSATLCMFMWLPIGLVMAIYRIFLGVFLCCKFTMALGAWCGLKLNFKDNNQKKSESDKGVLYVCTHRTLLDPIFLSSGLGRPLTAVTYSLSKVSEFIAPIRTIRLTRDRKEDGETMKRLLGEGDLVVFPEGTTCREPYLLRFSSLFAELADEIVPVAVNVHPSMFYGTTASGLKVLDPFFFFMNPSPKYDIEILEKVPRELTCAGGRSSHEVANHIQKQLGYALGFECTNLTRRDKYMMLAGNEGVVQENKGRRF 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02998 531 PANTHER ANCIENT UBIQUITOUS PROTEIN 65 527 - -
Vimu2g02998 531 SMART plsc_2 336 437 IPR002123 GO:0016746
Vimu2g02998 531 CDD LPLAT 326 496 - -
Vimu2g02998 531 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 258 524 - -
Vimu2g02998 531 Pfam Acyltransferase 325 429 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02998 Vimu-Chr2 29642271 29645713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02998 10 524 Acyl Lipid Metabolism Gene Families AT1G06520 53.356 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02998 K13508 - gmx:100786742 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02998 2 29642271 29645713 Vimu1g00416 1 2511599 2513845 PCT