Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02991 ATGTGGGATCTCAATTGGGTTCTATGTTTGGTGAAGAAGGGTTTGGGAGAAGGGAGAATAAGCTGGTATTGTTGTGGGTTTGTGATAATGAGCAGGGGTAGGTATGTTTTGGAGAATTTTTGGGTGTCAGGGGAAAATGCAGCAAGATCACCGGAAAAAGATATGGACTTTTTCTCTGAATATGGTGATGCCAACCAGTTCAGGATTCAAGAAGTCATTGGGAAGGGTAGTTATGGTGTTGTCTGTTCAGCCATTGACACTCGCACTGGAGAAAAAGTGGCAATTAAGAAGATTCATGACATCTTCGAGCATATATCTGATGCTGCTCGAATTCTCCGTGAGATAAAGCTGCTCAGACTTCTTCGACATCCTGATATTGTAGAAATAAAACACATTATGCTGCCTCCGTCATGGAAGGACTTCAAAGATATCTATGTTGTTTTTGAGCTCATGGAGTCTGATCTTCATCAAGTCATCAAAGCCAATGATGACTTGACAAAAGAACACTATCAGTTTTTCCTTTATCAATTACTTCGAGCATTGAAGTACATTCATAGTGCAAATGTCTATCATCGAGATTTGAAACCAAAGAATATACTGGCAAATGCAAACTGTAAGCTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCCTTCAGTGACACGCCAACAACTATATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCTCCAGAGCTATGTGGATCATTTTACTCAAAGTATACACCAGCAATTGATATATGGAGTATAGGTTGTATCTTTGCGGAAGTACTAATGGGAAAGCCACTTTTTCCTGGGAAAAATGTAGTCCACCAATTGGACCTGATGACAGATCTGCTTGGAACACCTTCACTTGATACTATATCACGGGTACGCAATGAGAAAGCAAGGAGATACCTAACTAGCATGAGGAAAAAGCAGCCTGTGCCGTTTTCTCAAAAGTTTCCCAATGCAAACCCTTTAGCACTGCGTCTACTGGAAAGGTTGTTGGCTTTTGATCCAAAAGATCGGCCTACGGCAGAAGAGGCATTGGCGGATCCTTACTTTAAGGGGCTGGCAAAAGTTGAGAAGGAGCCATCTTGCCTTCCTATCACAAAAATGGAATTTGAATTTGAAAGACGAAGAGTCACAAAGGAAGAAATTCGAGAACTGATTTTCCGTGAGATTCTAGAGTATCACCCTCAGCTATTGAAAGACTACATGAATGGAAATGGGAGAACCAATTTTCTTTATCCAAGTGCTGTTGATCAATTCAGAAAGCAGTTTGCTCATCTGGAGGAAAATGGTAAAAATGGTCATGTTATGCCACTTGAAAGAAAGCATGTTTCTCTTCCAAGGTCAACCATTGTACATTCAAATTCTAATACAATACACCCAAAAGATCAAACAAACATTGCTGCCTGCAAAAACCGACCAACTGCTGAGGAATGCAACAGGAATTCCAGAGATACAAAAAGTTTAGTGCCAAGGTCAATGCAGGGACCACCAAGAATTCCACTAGCAAAACCTGGTAAAATTGTGGGGCCAGTTGTTCCATACGAGTACGATAACATTGTCAAGGATTCTTATGATCCTAGGTCGTTTATCAGAGGTTCTGTGCTTCCTACTCAACCTGTTCCCCCAGCATACTATTATCATCAGAGATCCAGCACTGGAAATCAAGAAAGGGCTGCAACAGAAGCTGACAAGAGTGTGCCCTTGCAAGCAAAACAACATGATCAAGAACAATTTGGAATTAATGCCAATAGGACACCAGATATAGCTATTAATATTGATACAAATCCCTTTTTTATGACAAGGGCAGGAGTTAACAAGTTAGAGCAAGGTGATCAAATAGTCATAGAGACAAACTTGTTGCAGCCAAAGACATATGGTGGAAGCAGTGCTGCAGCTGGGGCCACTGCTCATAGAAAGGTGGGTCCTGTTCAGAAAATCCTCCCAAATTTTCCCGGAAAACTCTCGTCCTCGCGACCTCGTCATTCATTCTCTCGCACTCCTTTCCACTCATCAATCTCTCACTATCCACTGTTCCTCTCATCCCCCTTTTCGCCACCTAGAAATCACGAGCACTCTTCACACCGATCGAATCTCATCGATTTACTTTCTCCCACCGCGATGGATATCGCGGACGGCGTCGTGTCGAAGATGGAGGCGCTGGAGCGCGATAACGCGTCGAAGAAGGACGAGATCCATAATCTGAAGATAGAGATCGAGTCGCTGCGGCGAGAGGCGGAGGAACTGGAGTCGGAGATGAATGCCGTTGAGGAGGCCGGATCAGAGGCGGTGGTGCTGAGCAGCGTGCTCGAGGATCGAGAGAGAATGTTGACGTTTCTGGAGAGGGAGACAAAGACTATGAAGCAGATGAACGCAGAGAGCGAGATGAAGGTGCGCGATCTGGAGCGGAGGATTGGCGTTCTGGAAGTGCGGAAGAGCGAGGAGCGGTGTAAAAGAGTTCGCGTGGAGGAGGAAATGAGAGAGAAGGTTGGCGAGAAAGAGAAAGAGATTGAAAGACTGAAACAGAGAATCAAGGATTTGGAGGAAGCGAAGGGTGTGGGAAGGAAACAGAACAGCGAAATTGAGGACGAGGAAGAAAAGAAGGTATTAGGGTTTATGTGGCCGCTGGTTGCAGCCGGAGGTGCAGCCGTGGTTGCTGTGTTTTATTTCTATTTTCGAAAACGTAGGTGA 2712 0.441 MWDLNWVLCLVKKGLGEGRISWYCCGFVIMSRGRYVLENFWVSGENAARSPEKDMDFFSEYGDANQFRIQEVIGKGSYGVVCSAIDTRTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSWKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHSANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLMGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPVPFSQKFPNANPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEKEPSCLPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYMNGNGRTNFLYPSAVDQFRKQFAHLEENGKNGHVMPLERKHVSLPRSTIVHSNSNTIHPKDQTNIAACKNRPTAEECNRNSRDTKSLVPRSMQGPPRIPLAKPGKIVGPVVPYEYDNIVKDSYDPRSFIRGSVLPTQPVPPAYYYHQRSSTGNQERAATEADKSVPLQAKQHDQEQFGINANRTPDIAINIDTNPFFMTRAGVNKLEQGDQIVIETNLLQPKTYGGSSAAAGATAHRKVGPVQKILPNFPGKLSSSRPRHSFSRTPFHSSISHYPLFLSSPFSPPRNHEHSSHRSNLIDLLSPTAMDIADGVVSKMEALERDNASKKDEIHNLKIEIESLRREAEELESEMNAVEEAGSEAVVLSSVLEDRERMLTFLERETKTMKQMNAESEMKVRDLERRIGVLEVRKSEERCKRVRVEEEMREKVGEKEKEIERLKQRIKDLEEAKGVGRKQNSEIEDEEEKKVLGFMWPLVAAGGAAVVAVFYFYFRKRR 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02991 903 SUPERFAMILY Protein kinase-like (PK-like) 64 362 IPR011009 -
Vimu2g02991 903 Gene3D Phosphorylase Kinase; domain 1 82 404 - -
Vimu2g02991 903 MobiDBLite consensus disorder prediction 480 510 - -
Vimu2g02991 903 SMART serkin_6 67 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu2g02991 903 FunFam Mitogen-activated protein kinase 153 381 - -
Vimu2g02991 903 Coils Coil 798 818 - -
Vimu2g02991 903 Pfam Protein kinase domain 68 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu2g02991 903 ProSitePatterns MAP kinase signature. 102 205 IPR003527 GO:0004707|GO:0005524|GO:0006468
Vimu2g02991 903 CDD STKc_TDY_MAPK 66 403 - -
Vimu2g02991 903 ProSiteProfiles Protein kinase domain profile. 67 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu2g02991 903 ProSitePatterns Protein kinases ATP-binding region signature. 73 97 IPR017441 GO:0005524
Vimu2g02991 903 Coils Coil 830 874 - -
Vimu2g02991 903 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 68 406 - -
Vimu2g02991 903 FunFam Mitogen-activated protein kinase 59 160 - -
Vimu2g02991 903 Coils Coil 725 769 - -
Vimu2g02991 903 Gene3D Transferase(Phosphotransferase) domain 1 153 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02991 Vimu-Chr2 29384677 29392073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02991 54 493 MAP Kinase Gene Family AT2G42880 84.141 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Vimu2g02991 Pkinase 1.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02991 - - gmx:100811788 1061.6