Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02966 AATCGGGGAAAACAACAACGCACCTTCATACAGATGAGGACCGTTCTCAAGGTTGTGGATAACTCGGGGGCTAAAAAGGTGATGTGTATACAGGCATTGAAAGGGAAGAAAGGAGCAAGATTAGGTGACACAATAATAGCATCAGTGAAGGAAGCACATCCTAATGGAAAAGTGAAGAAAGGAAAGGTTGTATACGGGGTAGTTGTGCGTGCAGCAATGCCAAAGGGACGTTGTGATGGCAGTGAGGTCAAGTTTGATGATAATGCTGTGGTGCTTGTTGACAAGCAAGGCCAACCTATTGGAACCAGAGTTTTTGGACCAGTGCCTCATGAACTGAGACAAAAGAAACATGTCAAGATTCTTACCTTGGCAGGGCACATTGCATAA 387 0.447 NRGKQQRTFIQMRTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMPKGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02966 128 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 10 127 IPR000218 GO:0003735|GO:0005840|GO:0006412
Vimu2g02966 128 Gene3D Ribosomal protein L14 9 128 IPR036853 GO:0003735|GO:0005840|GO:0006412
Vimu2g02966 128 FunFam 50S ribosomal protein HLP, mitochondrial-like 9 128 - -
Vimu2g02966 128 ProSitePatterns Ribosomal protein L14 signature. 66 92 IPR019972 -
Vimu2g02966 128 SUPERFAMILY Ribosomal protein L14 10 127 IPR036853 GO:0003735|GO:0005840|GO:0006412
Vimu2g02966 128 Hamap 50S ribosomal protein L14 [rplN]. 9 128 IPR000218 GO:0003735|GO:0005840|GO:0006412
Vimu2g02966 128 SMART Ribosomal_L14_2 9 128 IPR000218 GO:0003735|GO:0005840|GO:0006412
Vimu2g02966 128 Pfam Ribosomal protein L14p/L23e 10 127 IPR000218 GO:0003735|GO:0005840|GO:0006412
Vimu2g02966 128 NCBIfam 50S ribosomal protein L14 10 127 IPR005745 GO:0003735|GO:0006412|GO:0015934
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02966 14 111 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 35.238 2.80e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02966 K02874 - gmx:100818301 226.868