Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02964 ATGTTGTTACGTGGCGCTGTCTCCGCTCCCCTTCCACCCTGTCTCCGTTTCGGCAAAACCAGGGTGCGAACCCTCCCCCGAAGCGTCTCCGTCGCATCGTCCTCCCCTTACGGTGGCGACTACCCGCTCTCAGTCTCCGACGAGGCGCTGGAGTCGCGTGGGTTCTTATTGCGGCGCGACGCGGAGGGGCTGGACCTGGAGGAGCTGAACACTGTGTTCGTGGCGGTGGGGTTCCCACGGCGGGACCCGGAGAAGATCCGCCTGGCTCTGGAGCACACGCAGGCGGTTCTATGGGTGGAGCACCGGAGGACGCGGCGGCCGGTGGCTTTCGCGAGGGCAACCGGCGACGGCGTCTTCAACGCCATCATATGGGACGTGGTGGTGGACCCGTCGTTCCAGGGCATCGGGCTCGGCAAGGCCGTCATCGAGAGGCTGCTGAAGGAGCTTCTGGGAAGAGGAATTTCCAATATTGCCCTTTATTCGGAGCCCCGAGTTCTCGGGTTCTATCGCCCGTTGGGCTTCGTCGCCGATCCCGATGGCATACGGGGAATGGTTTACTCTAAACGACAAAAGAAAAAATAG 582 0.622 MLLRGAVSAPLPPCLRFGKTRVRTLPRSVSVASSSPYGGDYPLSVSDEALESRGFLLRRDAEGLDLEELNTVFVAVGFPRRDPEKIRLALEHTQAVLWVEHRRTRRPVAFARATGDGVFNAIIWDVVVDPSFQGIGLGKAVIERLLKELLGRGISNIALYSEPRVLGFYRPLGFVADPDGIRGMVYSKRQKKK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02964 193 Pfam Acetyltransferase (GNAT) family 80 174 IPR000182 GO:0016747
Vimu2g02964 193 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 64 178 IPR016181 -
Vimu2g02964 193 CDD NAT_SF 106 160 - -
Vimu2g02964 193 Gene3D - 59 188 - -
Vimu2g02964 193 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 56 192 IPR000182 GO:0016747
Vimu2g02964 193 PANTHER ACYL-COA N-ACYLTRANSFERASE 42 191 IPR045039 GO:0008080
Vimu2g02964 193 FunFam Putative acetyltransferase NSI 60 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02964 Vimu-Chr2 28650451 28651032 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu2g02964 Acetyltransf_1 7.1e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02964 K22450 - gmx:100778613 316.62