Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02958 ATGGTAGGACCCAAGCGCCACTTCCTCCCTCTCATTCTCATCTCCCTCGCCGCCTTCATCTTCTACACCTTCAACCACTTCTCTCTCTCGCCAGCCATTGCTGAATCAAACCACAGATCCACTTTCCCAGACCCGATTCCAACCCTAATCCGTCCCAATTTCAATTTTGTTATCAACGTCCTCGCCTTCAACCGCCTCGCCTCACTCTCCCGGTGCTTACGCTCCCTTGCCGCCGCCGACTACCTCGGCGACCGCATCCACCTCCACCTCCACATCGACCACTTCGTCTCTGACAAAGCATCGAGCGTGGACCCTAAACTCCGGGAGGCACGTCGGATCTTGGAGTTCGTCGACGCGTTCGATTGGAAGTTCGGGGAGAAGGTTGTGCATTACAGGACGGGCAATGTTGGCCTGCAGGCCCAGTGGTTGGAGGCCTGGTGGCCCACTTCCGATCACGAGTTCGCCTTCGTGGTGGAGGATGACTTGGAGGTTTCCTCGCTTTACTATCAGTTCGTTAAGGCGGTGATTCTCAATTTCTACTACAATGCCTCCAATTATAGCCCTTCCATCTTCGGGGTTTCTTTGCAGCGAGCAAGGTTTGTTCCAGGCAAACATGGAAACAAATTACAGTTGGATGACAAGACAAGGCTTTTCTTATACCAATTAGTTGGCACATGGGGTCAAATTCTCTTTCCAAAGCCATGGAAAGAGTTCAGGCTGTGGTATGAAGAAAACAAGGCAAAGGGCAATTGGCCTTTTCTTGAGGGGATGGTGACTACGGGATGGTATAAGAGATTGGGAGAGAGGATTTGGACACCTTGGTTCATTAAGTTTATTCAGTCCCGGGGTTACTTCAATATATACACAAATTTTCTGCATGAGAGAGCATTAAGTGTTTCTTACAGAGATGCTGGAGTAAACTATGGGAAAACTGCTGGACCTGATTCTAAATTACTTGAGAAAAGATATATGGACTTCAATATTTTGGAAATGCAACCTTTGAGTAGTTTAAAATGGTTTGATTTTTGTTTTAGAGAAGTACATCCTGGAAAGGTTGTCACAAACCTAGAAGAACTTGGATTGTTGCTTCACTATCGGCAGAAGCGGGATAGTGTCTTAGTAAATCTTTTTGGGGTATCAGATGCTATAGCAAGCAACTTACTCTGCCACTTTGAGAGGCTAAATATCAGGAATTATATACTTATGGGCCCTCCATCTGACTCCTTATTTGATCTGGCAAGGAGGGGACATCCTGTAATTAATGTTGACCAATTTTTAAGTAGTGTTGGATTGTCTAAACATACTTGGCAAGGTTCAAATTCTGATTCCATCAAGAGTATTTTGGCAAAGATCTATGCAATTAAGAAGTGTATCGAGAATAAATATAACACGTGGGTTATGGATGGGAACATGCTTCTCACTTCAGACCTCTTTTCTGAGTCAGAAAATCCCAATGACGACTTCTTTGTAGCGAACAATTTTGAACTCTTTTATGCTAAAAGCTCATCTTCTAGTGAGAAAATCTGGGTTGATGGATTTGTTTCGAAGATTGTAGCTGAGGTGGAGTCTTTGGCAGGAAAAGATTCCGAAGCCCATTATAGGTTAAGCTTTGTGCACATTGTTACAAAATTATTGGAACAGAAAGGTGCGAGGATTAGAAGAGTTGATGAGAGTTCTTTGGCCACGAAAATTGGCTCTGGTAACGTGAGTGAATCTTTTCATGTTGATAAAAAGTTGGTATTCTGGTCAACTGAGATGGAGCTGGATTCAATTAGGAAATGGTTCAAAGAGTTGAATTTGTGGAGTATAGACAATGATTTGTCTTGCACCGCGGTGCATGATGTGCCTGTGAAGCTTGTTATAGACTATGCAATGGCGTATACTGTGGATGAGGTTGACATAGTTTTTGTTGGGGCGGATGGAGTTGTTGAAAGTGGTGGTATGATCAACATGATGGGGATTTGCCAAATTGCAATGGTCGCTAAGAGTATGAACAAGCCAGTTTATGTGGCTGCTGAAAGCTACTAG 2028 0.4408 MVGPKRHFLPLILISLAAFIFYTFNHFSLSPAIAESNHRSTFPDPIPTLIRPNFNFVINVLAFNRLASLSRCLRSLAAADYLGDRIHLHLHIDHFVSDKASSVDPKLREARRILEFVDAFDWKFGEKVVHYRTGNVGLQAQWLEAWWPTSDHEFAFVVEDDLEVSSLYYQFVKAVILNFYYNASNYSPSIFGVSLQRARFVPGKHGNKLQLDDKTRLFLYQLVGTWGQILFPKPWKEFRLWYEENKAKGNWPFLEGMVTTGWYKRLGERIWTPWFIKFIQSRGYFNIYTNFLHERALSVSYRDAGVNYGKTAGPDSKLLEKRYMDFNILEMQPLSSLKWFDFCFREVHPGKVVTNLEELGLLLHYRQKRDSVLVNLFGVSDAIASNLLCHFERLNIRNYILMGPPSDSLFDLARRGHPVINVDQFLSSVGLSKHTWQGSNSDSIKSILAKIYAIKKCIENKYNTWVMDGNMLLTSDLFSESENPNDDFFVANNFELFYAKSSSSSEKIWVDGFVSKIVAEVESLAGKDSEAHYRLSFVHIVTKLLEQKGARIRRVDESSLATKIGSGNVSESFHVDKKLVFWSTEMELDSIRKWFKELNLWSIDNDLSCTAVHDVPVKLVIDYAMAYTVDEVDIVFVGADGVVESGGMINMMGICQIAMVAKSMNKPVYVAAESY 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02958 675 Gene3D - 593 675 IPR042529 -
Vimu2g02958 675 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 56 310 IPR029044 -
Vimu2g02958 675 SUPERFAMILY Nucleotide-diphospho-sugar transferases 56 352 IPR029044 -
Vimu2g02958 675 Pfam Initiation factor 2 subunit family 613 675 IPR000649 GO:0044237
Vimu2g02958 675 PANTHER OSJNBA0004B13.7 PROTEIN 51 472 - -
Vimu2g02958 675 SUPERFAMILY NagB/RpiA/CoA transferase-like 613 675 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02958 Vimu-Chr2 28529100 28532480 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02958 614 675 Eukaryotic Initiation Factors Gene Family AT1G53880 80.645 7.07e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02958 - - gmx:100775691 1034.25