Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02941 ATGGTAACCATCAAAGCTTCGTACACAGTAGTTCTGAATCAACCAACTCCAGGAGGTATCCAATGGCTCTCTGATTTCGATCAAGTGGCGCGTATGTGCCATACACAGACCATCTACGTTTTCCATGCAAAGCACAACCATGACGCATTAGTTGAACAGATGAGAAACTCTCTTAGCAAGATTTTGTCGCATTACTATCCAGTTGCTGGTAGATTCAGAAGGTTAGAAGAAGGTGGCAGATGGGAATTGGATTGTAATGCAAAAGGGGCGGTGTTGATTGAAGCAGAATCCACAAAAACAGTGAACTATTATGGTGACTTTTTGGGTGAATCCGCCAATGACTTGGTTCCAACAGTCAATTACACAAAAACCTTCATTGAGGAACTTCCCTTGTTACTAGTGCAAGTAACAAGCTTCCTTGGTGATGAAGCGTTTTCCGTTGGGATTGCTCTATCTCATCTTTTGTTTGATGGTATTTCTGCCATTCACTTCATCAATTCATGGGCAAAGTTGGCTCGTGGAGACACATTAGAGCCTCATGAAATGCCCTTTCTGGATCGAACTGTGCTAAAATTCACTGATCCTCCATCAACCTCACGCTTTGATCACCAAGAGTTCAAGCCTATGCCTCTCATATTAGGAAGAAGTGAGAACACTGTTGAGAGAAACAAGATGGTAAATGCCACTACGTTGAAGCTGACAGCAGAACAAGTGGGGAAGTTGAAGAACAAGGCGAATGCTGATAAATCAACAAAAGGGTCAAGACCTTATACCAGATTCGAGGCTATTGCTGCACATGTGTGGAAATGTGCATCTAAGGCTCGTGGATTAGATGAGAATCAACCAACGCTGCTTCGGTTCAGTGCTGATATTCGCAATAGACTCATTCCACCTCTCCCTAGGAATTACATTGGTAATGCTTTGACCATAGGATCAGCATCATCACACGTTGGAGAAATCTTATCAAGTCCTTTGGCTCATGTTGCTCAGAAAATAAGGGAATCTGTTGAATCGATTACACATGAGTTTATATGCGCACAGATAGATGTGATTAGAAGTCAGGACCATGTGAATAAAGCGAGAACTTTGTTTTTTGGAGCAAACGAAGGCAAGGATGTACTGTTTTTTGGGAACCCTAACTTACGTATTACAAGTTGGCTGAGTATGCCAATGCATGAAGCAGATTTTGGTTGGGGAAAGCCTGTGTATGTAGGTCTAGCAGGTGTGGTTAGACAAGAGAGGGCAGTGATTACCCAAAGTCCAGATGGTGATGGCTCTGTTATTCTGGTTCTACACTTTCAAGTGGAACATATGCAGCTTTTCAAGAACTATTTCTATGAAGAAATATAA 1350 0.4222 MVTIKASYTVVLNQPTPGGIQWLSDFDQVARMCHTQTIYVFHAKHNHDALVEQMRNSLSKILSHYYPVAGRFRRLEEGGRWELDCNAKGAVLIEAESTKTVNYYGDFLGESANDLVPTVNYTKTFIEELPLLLVQVTSFLGDEAFSVGIALSHLLFDGISAIHFINSWAKLARGDTLEPHEMPFLDRTVLKFTDPPSTSRFDHQEFKPMPLILGRSENTVERNKMVNATTLKLTAEQVGKLKNKANADKSTKGSRPYTRFEAIAAHVWKCASKARGLDENQPTLLRFSADIRNRLIPPLPRNYIGNALTIGSASSHVGEILSSPLAHVAQKIRESVESITHEFICAQIDVIRSQDHVNKARTLFFGANEGKDVLFFGNPNLRITSWLSMPMHEADFGWGKPVYVGLAGVVRQERAVITQSPDGDGSVILVLHFQVEHMQLFKNYFYEEI 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02941 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 16 443 - -
Vimu2g02941 449 Gene3D - 1 208 IPR023213 -
Vimu2g02941 449 Gene3D - 214 447 IPR023213 -
Vimu2g02941 449 Pfam Transferase family 1 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02941 Vimu-Chr2 28159132 28160644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02941 2 447 Monolignol Biosynthesis Gene Families AT5G48930 33.482 2.48e-82 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02941 K13065 - gmx:100778626 681.404