Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02931 ATGGTAGCCATTGTTGCTTCTTACAGTGTCTTTCCGAGTAAAGAAACTCCCAAAGGTCAATTATGGTTATCAGATAATGACCAAGTCGTGCGTTCAGGTCACACACCCACTATCTATGTATACCAAGCAAAACACAATGATGGCACCACCCAGAGGTTGATAAACTCTCTTGCTCAGATTTTAGTGCCCTACTACCCACTTGCTGGCAGGTTGAGCTTAGCAGAAACTGGTCGAATTCAAGTGGATTGCAATGCCAAAGGAGTGACTTTTATTGAAGCCGAAACCACAGAATCATTGGCTGATTACGGAGACTTTTCACCTTCTGATTCTGTCAGGGAGCTTGTTCCAAAGATTGATTACACTCGACCCATAGAGGAAATTCCTTTGTTGCTTGTGCAATCCACAAGATTCCGTGGTGGTGAAGGGTTTGTCATTGGAGTGGCTTTCTGTCACCCTTTGGCTGATGGGTTTGGTGGCATTCAGTTCATCAATTCCTGGGCAAAACTGGCTCGTGGAGAGACACTTGAGCCACTTGAATTGCCCTACCTTGATAGAACAATACTCAAACTCCAACACTCACCAACATCACCGTGCTTTGATCACCCCGAGTTGAAGCCTCTACCGCTAAAACTAGGAAGCTCTGACATCAACGCTGAGGAAAGCAAGAAGACAAGGGCTGTGCTACTGAAACTGACGCAAGAGCAGGTGCAGAAGCTGAAGAATGAGGCGAATGAAGAACCCTTGCAAGAAGGGGTGAGAGCTTATAGCAGATTTGAAGCTATTGCAGGTCATATATGGAGATGTGCAAGTAAGGCTCGTGAACTTGAAGAGAAGCAAGAAACGGTGGTTCGGTTCAATGCTGATATCCGTAGCAGACTGAATCCTCCTCTTCCTAGTAATTACTTTGGGAATGCTTTGACAGCAACAGTGTCACCGAAATGCTATGTTGGAGAAATAGTGTCAAAACCTTTGAGGTATGCTGCAGGAAAGGTAAGAGAAGCGATTGAAAAGCTTAGTAATGAGTACATAAGGTCACAACAGAGGATTGTGTTAGGTGAGGAGCAATTGGATTGCATAAGGGGTTTGTTCTTGGGACAAGGAGAGCGTAGAAATGTCCCTTTTGCAGGGAATCCGAATCTTCAAATCACAAGCTGGATGAGCATGCCAGTGTATGAAGCAGATTTTGGATGGGGAAAGCCTGTGTTTTTCGGGTTGGCATATGTTGCTTCGCAAGATAGGGCTGTGATTCTTCTGAGTCCAGATGGTGATGGATCCATTATTGTATCCATGCACTTCCAAGAACCACATTTGGAGCTTTTCAAGAAATTCTTCTACCAGAGTTTGTGA 1347 0.4477 MVAIVASYSVFPSKETPKGQLWLSDNDQVVRSGHTPTIYVYQAKHNDGTTQRLINSLAQILVPYYPLAGRLSLAETGRIQVDCNAKGVTFIEAETTESLADYGDFSPSDSVRELVPKIDYTRPIEEIPLLLVQSTRFRGGEGFVIGVAFCHPLADGFGGIQFINSWAKLARGETLEPLELPYLDRTILKLQHSPTSPCFDHPELKPLPLKLGSSDINAEESKKTRAVLLKLTQEQVQKLKNEANEEPLQEGVRAYSRFEAIAGHIWRCASKARELEEKQETVVRFNADIRSRLNPPLPSNYFGNALTATVSPKCYVGEIVSKPLRYAAGKVREAIEKLSNEYIRSQQRIVLGEEQLDCIRGLFLGQGERRNVPFAGNPNLQITSWMSMPVYEADFGWGKPVFFGLAYVASQDRAVILLSPDGDGSIIVSMHFQEPHLELFKKFFYQSL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02931 448 Pfam Transferase family 1 445 - -
Vimu2g02931 448 Gene3D - 213 447 IPR023213 -
Vimu2g02931 448 Gene3D - 1 206 IPR023213 -
Vimu2g02931 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02931 Vimu-Chr2 27892123 27893794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02931 2 446 Monolignol Biosynthesis Gene Families AT5G48930 38.255 2.78e-105 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02931 K13065 - gmx:100779814 691.804