Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02916 ATGATTTCTTCCTTGAGACAGCCTGTTGTGGGGATCAGTGGTTCTGATCTTCTTTTGAGGCAAAGACATGCAAGCCCAGTTAAGGCACGGTCGTTTTTGCCTTTTTTGGCAAGGGAAAAGGGGCAGGGATCTCTGGTTTCAGTGCATAAGCCACTGCACATTGCTTCTTCTCTTGGTGGTGCAAATTTTTCTTCAGTGAAGAGTGGTGGAAAGGTTGATTTGGTGAAGTGCGAGGCCTATGAGGCAGACAGATCAGAGGTTGAGTCTACAAACACACCATCAGAGGCTTCAAAGAAGGTGAAGATTGGCATATATTTTGCAACCTGGTGGGCTCTGAATGTGGTGTTTAATATTTATAACAAGAAGGTGTTGAATGCCTACCCCTTCCCGTGGCTGACTTCAACTCTCTCACTTGCATGTGGGTCTCTCATGATGTTGATCTCTTGGGCCACTGGGATTGCAGAAGCCCCCAAGACCGATCCTGAGTTTTGGAAGTCTTTGTTTCCTGTTGCCGTTGCACATACAATAGGACATGTGGCAGCAACTGTTAGTATGTCAAAAGTTGCGGTATCATTTACACATATAATCAAGAGTGGTGAGCCTGCTTTTAGTGTTCTGGTTTCAAGATTTCTCTTGGGTGAGACTTTCCCCGTGCCAGTCTATCTGTCTTTACTTCCGATCATTGGTGGATGTGCACTTGCAGCCGTGACTGAACTCAATTTCAACATGACTGGTTTCATGGGTGCTATGATATCGAATTTGGCTTTTGTATTCCGTAATATCTTTTCAAAAAAGGGAATGAAGGGAAAGTCTGTCAGTGGAATGAATTACTATGCTTGTTTATCTATTTTGTCCCTTGCAATTCTCACACCCTTTGCAATTGCCGTGGAAGGACCACAGATGTGGATTGCCGGATGGAAAACATCGATCTCTCAGATTGGAAACCAACTCATATGGTGGGTAGCAGCTCAAAGTGTATTCTATCACTTATACAATCAAGTGTCATACATGTCTCTGGATGAGATCTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATATCTGTCATAGTGTCTTCGATTATTATCTTCCACACTCCAGTTCAACCTGTTAATGCTCTTGGTGCCGCTATTGCTATCCTTGGAACCTTCTTATATTCACAGGATGCTCTGGCTGTCAGTCCATCTGTAGATAGATATAATAATAAGAATGATGCTGCTGAGGAAACATTATTATAA 1245 0.4305 MISSLRQPVVGISGSDLLLRQRHASPVKARSFLPFLAREKGQGSLVSVHKPLHIASSLGGANFSSVKSGGKVDLVKCEAYEADRSEVESTNTPSEASKKVKIGIYFATWWALNVVFNIYNKKVLNAYPFPWLTSTLSLACGSLMMLISWATGIAEAPKTDPEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPQMWIAGWKTSISQIGNQLIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQDALAVSPSVDRYNNKNDAAEETLL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02916 414 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 101 390 IPR004696 GO:0016020|GO:0022857|GO:0055085
Vimu2g02916 414 Pfam Triose-phosphate Transporter family 101 389 IPR004853 -
Vimu2g02916 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 236 - -
Vimu2g02916 414 PANTHER SOLUTE CARRIER FAMILY 35 101 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02916 Vimu-Chr2 27682906 27686816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02916 1 393 Antiporters AT5G54800 73.449 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02916 K15283 - gmx:100801832 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02916 2 27682906 27686816 Vimu1g00472 1 2859344 2861461 PCT