Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02781 ATGAATACGAAAATGCAGAACGAAAAGCCGGAGCTGGTGCCTTCATCCGGAGACGACGACGACATCATTCTCAGTCAGCAACTGTTTTGCACACCGGATTACTTAACTCCCGAAGATCAGTTTCCTTTGAAAGGCTTCCATAGTAACATCGACAAGGTGGAGGAAGATAGCCCTTGCCCCAAGTCACCGGAGAAGCCGTATGCTACGAAAACCAAGAGATGCCGAATGGATGATGGTGATACTCTCAGATTTACCGATGATGAACCAGTTGTGGAACTTGGCAGTGACCATAATGAGCCATTTGTGGGATTAGAGAATCATTTTTTTCGAGAAGAAGATTATTATAATAAGCTAAGGACTCGAAGACATGTGTCGAGTTCTGCAATTGCTCTACGGTGCAGCACTCCTCTTTGTATTAGAAACTCCTTTTTGAAAAGCAATTCAGAGGAGGAAGAGGACATTTTTAGAAGCCAAACACTAAAATTTGATGACCTCATCCCTTCCATTATTGGTCGTAATGGTCTGTCACGCTATCTCTATGACTTTCGTTGGATTAAGAAAATTGGTGAGGGAAACTTTAACGAAGTTTTTAAAGTATTGAAGCGATTAGATGGCTGCATGTATGCTGTGAAATGTACCATCAAGCGGTTGTGTACGGAACCAGAAAGGCTTAAAGCTTTTAAAGAAGTTCAATCTTTGGCTGCCATAGGTTTCCATAAGAATATAGTGAGATATTATTCTTCATGGATTGAGGATGAACAAATGTATACTCAGATGGAGTTTTGTGATCACAACTTATCTAGTGAAAATTGTCCAACATTGCTTACCGAACGACATGAAATGGATGTTTTATATCAGGTTTCTAGTGCACTGCAATTTATACATGAAAAGGGAATAGCTCATCTTCATGTCAAGCCAGAAAATATTTACGTCAAAGATGGTATTTATAAGCTTGGTGGTTTTGGATGTGCGACTCTATTAGACAATAGCTTGCTTGTTGAAGAGGGTGATGCACGGTACATGCCGCTGGAGATTCTCAATAAGAATTATGATCACCTAGATAAGGCAGACATCTTCTCCCTAGGAGCTTCCATGTTTGACATAATTCGAAGGTCACATTTGCCAAAAGCAGAAACTGAGTTCTCTAAACTTAAAGAGGGAAAGGTGCCACACTTGCCTGGAGTTACAGTTCAGTTTCAAAACTTGCTCCAGGTCATGATGGACCCTGATCCTCTTAAGCGTCCTTCTGCCACTGAGATATTGGGAAATTCAATATTCAGAGGGTCCCTTAAAATGACATAA 1302 0.4071 MNTKMQNEKPELVPSSGDDDDIILSQQLFCTPDYLTPEDQFPLKGFHSNIDKVEEDSPCPKSPEKPYATKTKRCRMDDGDTLRFTDDEPVVELGSDHNEPFVGLENHFFREEDYYNKLRTRRHVSSSAIALRCSTPLCIRNSFLKSNSEEEEDIFRSQTLKFDDLIPSIIGRNGLSRYLYDFRWIKKIGEGNFNEVFKVLKRLDGCMYAVKCTIKRLCTEPERLKAFKEVQSLAAIGFHKNIVRYYSSWIEDEQMYTQMEFCDHNLSSENCPTLLTERHEMDVLYQVSSALQFIHEKGIAHLHVKPENIYVKDGIYKLGGFGCATLLDNSLLVEEGDARYMPLEILNKNYDHLDKADIFSLGASMFDIIRRSHLPKAETEFSKLKEGKVPHLPGVTVQFQNLLQVMMDPDPLKRPSATEILGNSIFRGSLKMT 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02781 433 MobiDBLite consensus disorder prediction 1 20 - -
Vimu2g02781 433 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 105 424 - -
Vimu2g02781 433 ProSiteProfiles Protein kinase domain profile. 182 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu2g02781 433 FunFam Wee1-like protein kinase 261 430 - -
Vimu2g02781 433 Pfam Protein kinase domain 185 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu2g02781 433 Gene3D Phosphorylase Kinase; domain 1 172 261 - -
Vimu2g02781 433 SUPERFAMILY Protein kinase-like (PK-like) 175 428 IPR011009 -
Vimu2g02781 433 Gene3D Transferase(Phosphotransferase) domain 1 262 429 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02781 19 426 Core Cell Cycle Gene Families AT1G02970 47.356 4.88e-130 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Vimu2g02781 Pkinase 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02781 K06632 - gmx:100784055 516.153