Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02713 ATGTCTCTCTCCACATATCTGTTCAGTCGCTTCTTAAATCTAGGAAAATTCCAGTTCCTCGTCAGAATCAAAATGCCCTTTCTGAGAGGTTTTAGATTTAATCTCTTTTTGGTGTATCTCTTAGCTACTTGGGTTCAAATCCAAACCAAGGTGGAAAGTTACCAATACAAAGTTGGAGATCTAGATTCCTGGGGGATCCCCACTTCATCAAATTCACAAGTCTATGACAAATGGTCCAAATATCACAACCTCAAGATCGGTGATTCCCTCTTGTTTCTGTACCCACCAAGCCAAGATTCATTGATTCAAGTGACAGAGGAGTCCTACAAGAGCTGCAACCTTAAAGATCCAATCTTGTACATGAACAATGGGAACTCGTTGTTCAACATTACATCTGTAGGGGAGTTTTACTTCACCAGTGCAGAGTTTGGTCATTGCCAAAAGCATCAAAAACTTCACATAACTGTCGGAGTTGGAGGAAACACCGACACACTTTCTCCATCTTCACTGCCTCAATCCGCACCTTCTTATCCAACTGCTTTTGGCGACATTCCCATGTCTCCTTCTAGTACTTCTTCACCTCACCCAAATTTAAAATTATCACTCATAATTACTGGATTCTTACTATGTGCACTCTTCCCGAGCCTATTAAGATAA 657 0.4094 MSLSTYLFSRFLNLGKFQFLVRIKMPFLRGFRFNLFLVYLLATWVQIQTKVESYQYKVGDLDSWGIPTSSNSQVYDKWSKYHNLKIGDSLLFLYPPSQDSLIQVTEESYKSCNLKDPILYMNNGNSLFNITSVGEFYFTSAEFGHCQKHQKLHITVGVGGNTDTLSPSSLPQSAPSYPTAFGDIPMSPSSTSSPHPNLKLSLIITGFLLCALFPSLLR 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02713 218 PANTHER BLUE COPPER PROTEIN 54 174 IPR039391 GO:0009055
Vimu2g02713 218 Gene3D - 54 166 IPR008972 -
Vimu2g02713 218 ProSiteProfiles Phytocyanin domain profile. 54 158 IPR003245 GO:0009055
Vimu2g02713 218 SUPERFAMILY Cupredoxins 53 156 IPR008972 -
Vimu2g02713 218 FunFam Early nodulin-like protein 1 53 161 - -
Vimu2g02713 218 Pfam Plastocyanin-like domain 72 149 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02713 Vimu-Chr2 24033324 24034056 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02713 50 186 Phytocyanin Superfamily AT1G64640 63.768 2.10e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02713 - - vra:106775534 377.481