Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02709 ATGTTGGAGTCTTATCAGTGTTCCTCTTGGTCATTACAGTTTTTGTCCAAAAGCATGGGATACGCTGTGTTCTTGAACGCTTCTTTCCTCCTTGTGATGTGTTCTTTTATGATTATTCATTTCCACACCCCGGAAACAGAAGTTGTGGTTGTGACCAAAATTTCTGCCTTTGGTAGCAGCAATGAGCAAGAATGTGAGAGCTTAGCCAGCCTAGATGACTTCAGAGCCAAGTGCCTGTACCTGAAATCCAATGATCCTTGTGCTCCTCAGGGCTATATTGATTATCTATACCTTTTCTATTGCCAGATTGGGAGTTACCCTTCATTAGGTTACACCCTTTTATTTCTTTGGCTCCTAATTCTGTTTTACTTATTGGCTAATACAACTTCTCAATACTTTTGTCCCTCCCTTGAAAGCATGTCCAAATTACTAAGGTTGTCCCCCACAATTGCGGGAGTCACCCTCCTCTCACTTGGCAATGGTGCCTGTGACGTTTTCTCTAGCCTTGTCTCTTTCCAGGGAAGTGGGACACGCAGCATTGGTTTTAACACGGTTCTTGGGGGTGTTTCTTTTGTGTCCTGTGTTGTGGTGGGGACTGTGAGTATCGCAGTACGTCAAAAGAGGGTTCAAATTGATAAGTCCGCGTTTGTGAGAGATGTTTATTCTCTCCTTTTAGTTCTTTTTACCTTGTTTGGGATTTTGATCTTTGGCAAGATCAATGTTCTGGGAGCAGTTGCTTTTACTATGATGTATGCTGTGTATGTAGCTATTGCTTATGTTTCTTCTACCAGATGTGATCGAGGTGGTGATGCTGCTGAGATGGGTGGTGTTGGTTGCGGCAATGATTTGAATTTGCCTCTTCTCGTTGGTGTGAAGAAAGAAGCAATTGATTGTGAGGAAAATGGTGGTGAAGAATATGGATTGAATGAGGAGAAGTATTGTTGTTGTATGAGATATTTAATGTGTAGAGTGCCACTTTATGTTCTGGAGATGCCCCTTTACATGCCTAGGAGATTGACAATACCTGTTGTGAGTGAAGAGAGATGGTCAAAGGTGTATGCAGTTTTTTCTGTTATACTAGCACCACTTCTCATGTCTTTCCTGTGGAGAAGTACTTATAATGGAAACAGTTTCTTCAGCAAGAACCTTATTGTTTATGGAATTGGACTTTTGGTGGGAAGTATACTTGGAGTAACTGCATATTTCACAACCAAACAGGTAGGGCCACCTAAGAAGTTCTTATTTGGTTGGCTTGCTGGTGGGTTTGTGATGAGTGTGACATGGAGTTATATAATAGCTCAAGAGTTGGTGGGGTTGCTTGTTTCAATTGGGTACATATGTGGAATAAGTCCTTCTATACTAGGGCTAACAGTTATGGCTTGGGGGAACTCAATTGGGGATTTGATGACAAATTTAACTATGGCTTTAAATGGAGGACCAGAGGGTGCTCAAGTAGCAATATCAGGTTGCTATGCTGCTCCCATCTTCAATATCCTCATTGGTTTGGGTTTGTCTCTTGTCACTGCTACATGGTCAGAGTACCCTCAACATGTTGAGATCCCTAGAGACCCTTATCTTTGGGAGACAATGCTGTTTTTGGTGGTTGGATTAGTTTGGGCACTTTTGGTTTTGATAAAAAGAGATATGAAGCTTGACACACTCTTAGGAGGAGGGCTTTTGTTTCTTTACTTTCTTTCTCTGTTTTCAAGACTTATTCATACAGAAGGTCATTCCAATAGTCTAATTTTATGA 1752 0.4138 MLESYQCSSWSLQFLSKSMGYAVFLNASFLLVMCSFMIIHFHTPETEVVVVTKISAFGSSNEQECESLASLDDFRAKCLYLKSNDPCAPQGYIDYLYLFYCQIGSYPSLGYTLLFLWLLILFYLLANTTSQYFCPSLESMSKLLRLSPTIAGVTLLSLGNGACDVFSSLVSFQGSGTRSIGFNTVLGGVSFVSCVVVGTVSIAVRQKRVQIDKSAFVRDVYSLLLVLFTLFGILIFGKINVLGAVAFTMMYAVYVAIAYVSSTRCDRGGDAAEMGGVGCGNDLNLPLLVGVKKEAIDCEENGGEEYGLNEEKYCCCMRYLMCRVPLYVLEMPLYMPRRLTIPVVSEERWSKVYAVFSVILAPLLMSFLWRSTYNGNSFFSKNLIVYGIGLLVGSILGVTAYFTTKQVGPPKKFLFGWLAGGFVMSVTWSYIIAQELVGLLVSIGYICGISPSILGLTVMAWGNSIGDLMTNLTMALNGGPEGAQVAISGCYAAPIFNILIGLGLSLVTATWSEYPQHVEIPRDPYLWETMLFLVVGLVWALLVLIKRDMKLDTLLGGGLLFLYFLSLFSRLIHTEGHSNSLIL 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02709 583 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 321 573 - -
Vimu2g02709 583 Gene3D - 352 570 IPR044880 -
Vimu2g02709 583 Gene3D - 146 277 IPR044880 -
Vimu2g02709 583 Pfam Sodium/calcium exchanger protein 418 568 IPR004837 GO:0016020|GO:0055085
Vimu2g02709 583 Pfam Sodium/calcium exchanger protein 115 259 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02709 Vimu-Chr2 24003077 24005436 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02709 12 579 Antiporters AT5G17850 49.650 9.04e-160 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02709 K13754 - gmx:100813848 786.949