Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02682 ATGACTAACGTGAGATTTTTCAAAATCCATAGTTGGAGCAAGTTTAATATATTTAATGTGTATCTTCCTAATGGTCTTAATACTCTGTCTCATAAAATGAGGTACCTTCATTGGGATGGATTCTGTCTTGAGTCTTTGCCAGCTAACTTCTGTGCTGAAAAACTTGTGGAGCTTTGCATGCGTTGTAGCAAGCTTAAAAAGCTTTGGGATGGTGCTCAGAACCTTGTGAATTTGAAGACTATTGACCTGTGGGGATCCCGAGACTTGATTGAGATTCCAGACTTATCCTTGGCAGAAAATCTTGAAAATGTTTCTCTTTGCTATTGTGAAAGCTTGCGTGAGGTCCATGTCCATTCAAAATCTCTTCGTGTACTGAACCTCTATGGTTGTTCATCACTAAGAAAATTTTCAGTGACATCAGAGGAATTGACAAGATTGAGCTTAGCTTTCACTTCTATATGTTCAATACCATCATCAATTTGGCACAAAAGGAAGCTCAAAGCTCTTTATCTAACGGGTTGTCGCAATCTCGGCAAGTTAACTGATGAACCAAGAATTCATGGCTCTCACAAGCACTCCCTCACAGCATTGGCATCTAATGCTGAGAGATTTTCCATGAACATCAAAAGCCTTTCAACATTGAGAATGCTTTGGTTAGACGATTGTAAGAAACTTGTGTCTTTGCCTAAGCTTCCACCATCCCTTGGGAAGTTGAGTGCTAGTAACTGCACTTCTCTAGACTCATACATGACTCAACGGCTAGTGTTGCAACACATGTTACAGAGTCGCATACCCTACTTACGCACGAACGATCTAAGATGTTATGACGAAGAGTATTTATTTCCAGGAAACCATGTGATTGATGAATGTGTGTTTAACACAACAGAGACTTCAATAACTATTCCTTATCTTTGGAAAACTGAATTGTATGGTTTCATCTATTGCATCATTCTCTCTAAGGGATCACTCTTGCAGTCTGATGTTTCGTGTTCTGTTTATCAAGATGGCATAAGGGTTGGTTGGCTCCAGAGGTTGTTGGAATACGAAAGTTTAACTTCGAATCACGTGCTATGTATGTATCATGACATCAATGAATTTGATGCAATAACTGAAGAAGGGCATGGCCATTTCTTCAGCAAC 1140 0.3947 MTNVRFFKIHSWSKFNIFNVYLPNGLNTLSHKMRYLHWDGFCLESLPANFCAEKLVELCMRCSKLKKLWDGAQNLVNLKTIDLWGSRDLIEIPDLSLAENLENVSLCYCESLREVHVHSKSLRVLNLYGCSSLRKFSVTSEELTRLSLAFTSICSIPSSIWHKRKLKALYLTGCRNLGKLTDEPRIHGSHKHSLTALASNAERFSMNIKSLSTLRMLWLDDCKKLVSLPKLPPSLGKLSASNCTSLDSYMTQRLVLQHMLQSRIPYLRTNDLRCYDEEYLFPGNHVIDECVFNTTETSITIPYLWKTELYGFIYCIILSKGSLLQSDVSCSVYQDGIRVGWLQRLLEYESLTSNHVLCMYHDINEFDAITEEGHGHFFSN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02682 380 Gene3D Ribonuclease Inhibitor 2 118 IPR032675 -
Vimu2g02682 380 SUPERFAMILY L domain-like 6 275 - -
Vimu2g02682 380 Gene3D Ribonuclease Inhibitor 119 262 IPR032675 -
Vimu2g02682 380 Pfam Leucine Rich Repeat 54 73 IPR011713 -
Vimu2g02682 380 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 245 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02682 Vimu-Chr2 23672405 23673626 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02682 1 248 WRKY Transcription Factor Family AT5G45050 34.387 4.99e-28 114