Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02664 ATGATGATGATGATGTTTGATGAGATGGGGTTTTGCAATGATTTGGATACTGTCACTGCGACCCTTGGAGAAGAAAATATTACCACTGGGCAAGCTGATCCAGAGGCCATAGTTGAGGATGATTTTAGTGATGAAGAAATTGGAGTAGATGAGCTTGAGCACCGGATGTGGAAGGACAAAATGCTTCTCAAGAGATTGAAGGAGCAAAGTAAATCCAAAGAAGGAATCGATGCCGTGAAGCAGAGGCAGTCTCAAGAACAGGCAAGGAGGAAAAAGATGTCCAGGGCTCAAGATGGAATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGCAAGGCACAAGGATTTGTTTATGGGATAATCCCCGAGAAGGGGAAACCAGTGACAGGAGCATCTGATAATCTTCGTGAATGGTGGAAGGATAAAGTAAGGTTTGATCGAAATGGACCTGCTGCTATAACAAAGTACCAGGCTGATAATGCTATCCCTGGAAGGAATGATGGATGCAATTCGATTGGTCCAACTCCACATACCTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTCTTGTCAGCACTCATGCAACACTGTGATCCTCCTCAGAGGAGGTTTCCCTTGGAGAAGGGTATTCCTCCACCATGGTGGCCCACAGGAAATGAAGTATGGTGGCCACAAATTGGTTTACCTAAAGATCAGAGTCCTCCTCCTTACAAGAAGCCCCATGACCTAAAGAAGGCATGGAAAGTTGGTGTTCTGACTGCAGTTATAAAGCACATGTCCCCAGATATTGCCAAAATTCGGAAGCTTGTGAGGCAGTCTAAATGCCTTCAGGATAAGATGACAGCCAAGGAAAGTGCAACCTGGTTGGCAATCATCAATCAGGAGGAGGCCTTGGCAAGAGAGCTTTACCCTGATTATATTCCCCCATTAGCCTCTGGTGGAGGGAGTGGATCTTTGGTGGTCAATGATGGCAATGAATATGATGTTGAAGGGGGTGAGGATGAGCCTAACTTCGATGTGGAAGAGAGGAAACATGAGAATATTCACATGTCCAATCTGGGGATGGAGAGAATGAGGGGAACTATGGGTGTTCAGCAGCCCTCTTTTTCTATCAAGGGAGAGGCAGTTACAAATTTGGATCTTCTTAGGAAGAGGAAGGTCTCTAATGACTTTAACATGATGGATTTGAAGATTTATACATGTGAACAGCCTCAATGCCCTTACAGTCAAGTTCAGCTTGGTTTCCCTGATAGAATCTCTAGGGACAATCATAGGTTAATTTGTGCATTCAGAGGTCCTTCAGATTTTGGGGGTCCAAACTTTAATGTTAATGAGGTAAAGCCAGTGATATACACCCAGTCCTTTGTTCCACCCAAGTCTACTGCTCAGTCTGCTAACATGGCCCCGTCTGTAATTGATCTCACTGGACTTGAAGTTTCAGAAGATGGCAAGAAAAGAATCAGCGACCTTATGACTAACTACGATACAAATGTTCAGGGCAACAAGAACATGAGTTCATGTAATCGTGTAGCTGGCGAGGTTTTGAACTTTCCTCAGCATGGCATGCAGCAGCATCAACAGGACAACAACTTCATTCGCGGTCGAGGAATCACTATGGAAGGAAACGTCTTTGACGAAGCTACCATGTCAAATAATCATCATACTTTTGCAAGAGACGAATGCCAATTTGACCGGTTCAAAGCTTTGAATAGCCCCTTTGAGACCAATCACAGCAACAACAGTAACTTCCATTCCATGTTTGGGTCCTTTTGTGATTTGGCATCATTTGATTTCAAGGAGGATATGCAAGGAGTAGGAATGGATGCAGTTCAGAAACAGACAGATTTTTCTGTATGGTACCAGTGA 1869 0.443 MMMMMFDEMGFCNDLDTVTATLGEENITTGQADPEAIVEDDFSDEEIGVDELEHRMWKDKMLLKRLKEQSKSKEGIDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNAIPGRNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIPPPWWPTGNEVWWPQIGLPKDQSPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYIPPLASGGGSGSLVVNDGNEYDVEGGEDEPNFDVEERKHENIHMSNLGMERMRGTMGVQQPSFSIKGEAVTNLDLLRKRKVSNDFNMMDLKIYTCEQPQCPYSQVQLGFPDRISRDNHRLICAFRGPSDFGGPNFNVNEVKPVIYTQSFVPPKSTAQSANMAPSVIDLTGLEVSEDGKKRISDLMTNYDTNVQGNKNMSSCNRVAGEVLNFPQHGMQQHQQDNNFIRGRGITMEGNVFDEATMSNNHHTFARDECQFDRFKALNSPFETNHSNNSNFHSMFGSFCDLASFDFKEDMQGVGMDAVQKQTDFSVWYQ 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02664 622 Pfam Ethylene insensitive 3 50 297 IPR047091 GO:0003700
Vimu2g02664 622 FunFam Ethylene insensitive 3-like 1 82 160 - -
Vimu2g02664 622 Gene3D - 82 159 IPR023278 GO:0003700|GO:0005634
Vimu2g02664 622 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 10 584 IPR006957 GO:0003700|GO:0005634
Vimu2g02664 622 MobiDBLite consensus disorder prediction 73 93 - -
Vimu2g02664 622 Coils Coil 49 69 - -
Vimu2g02664 622 Gene3D - 174 307 IPR023278 GO:0003700|GO:0005634
Vimu2g02664 622 SUPERFAMILY DNA-binding domain of EIN3-like 176 300 IPR023278 GO:0003700|GO:0005634
Vimu2g02664 622 FunFam Ethylene insensitive 3-like 1 170 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02664 Vimu-Chr2 23341013 23345098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02664 4 621 EIL Transcription Factor Family AT3G20770 57.781 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vimu2g02664 EIN3 1.4e-129 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02664 K14514 - gmx:100818629 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02664 2 23341013 23345098 Vimu1g00671 1 4318623 4320452 PCT