Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02644 ATGTTGTTGAAGCTCAAAACTTCTCAACCTCCTAAGCCATTGCATTGCAGTTCGTTCCGAACACCACACTGCACAATCCCATTCCAAAGCGCAACCGCTTTCTCCGAGCAACCACCGTCAATGAGTTTCCCAGAAAGCCCTCGCCATTCTTCTCCTTATTCTCCTTCCTCCCCTTCCTCTCCTTCCTACATTCCACCCCACCGTACCCAGCTGCACCCTCGCATGATCTCCCTCTATACTTCTTCTTCTCCTTCTTCTTCCAGTCACACAAATCCAAATCCCAACAAACCCCACACCGGAAAATGCCTTCTCTTCCTCTTCGCCTTCCTCTTCTTCACCGCTCCCTTCCTCTTCTACCTCTTCTCCACCGCCCTCCAAATCCACTCCTCCCCCAAATTCGCCGATTCTCGCCCTGTCTCCTTCGCCCTCGCTTTCCGCGCCGGCCCCGACGCTCTCCGCCTCTCCGTCTACCACTTTCTTGGCCCCGGCCTCGGCCTCCTCGCCGCCGCTCACTCCGCCGCCGCCGCTCCCGGCTTCGCTGCCCCGCCCGACGCGCTCCGTGGCGCCGTCGCTGAGCTTGTCCGGTTCGCTAAGGGCAAGGTGCCTCGCCGGGAGTGGGGGAACACCGTCGTGCGGCTTGCGGCCTCCGAGGAGCTCGAGCAGCTCGGCTCCGAGGAAGTAGAGAAGGTTCTGGAATGTTGCAGAAAGGCCTTAAAGGCGTCCGGGTTCTTGTTCAAGGATGAATGGGCACGCGTCGTTTCAGGAGAAGAACAAGGCATCTCTTCTTGGGTTGCAGTAAATTATGCTCTTGGAAACTTGGGACGCGAGCCTCACGAAACAACTGGAATAGTTGAACTTGGTGGGGGTTCTTTGCAGGCTACATCGACTAAACTTAATGCAGATTTAGCTCACACTTTGCGAACTATAAGATTGTCTAGGGTTACATACAACCTTTACACTTGGAGTTTGCCACAACTGGGTCAGATCTCCTTTGCAGAGTTGACAAAGAGGCATGTCAGGATGGTTGTTGGTGTGGAGCTGCTTTAA 1047 0.5511 MLLKLKTSQPPKPLHCSSFRTPHCTIPFQSATAFSEQPPSMSFPESPRHSSPYSPSSPSSPSYIPPHRTQLHPRMISLYTSSSPSSSSHTNPNPNKPHTGKCLLFLFAFLFFTAPFLFYLFSTALQIHSSPKFADSRPVSFALAFRAGPDALRLSVYHFLGPGLGLLAAAHSAAAAPGFAAPPDALRGAVAELVRFAKGKVPRREWGNTVVRLAASEELEQLGSEEVEKVLECCRKALKASGFLFKDEWARVVSGEEQGISSWVAVNYALGNLGREPHETTGIVELGGGSLQATSTKLNADLAHTLRTIRLSRVTYNLYTWSLPQLGQISFAELTKRHVRMVVGVELL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02644 348 MobiDBLite consensus disorder prediction 35 66 - -
Vimu2g02644 348 Gene3D Exopolyphosphatase. Domain 2 254 343 - -
Vimu2g02644 348 MobiDBLite consensus disorder prediction 35 57 - -
Vimu2g02644 348 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 102 329 IPR000407 GO:0016787
Vimu2g02644 348 Pfam GDA1/CD39 (nucleoside phosphatase) family 174 322 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02644 Vimu-Chr2 22848951 22859157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02644 138 292 Calmodulin-binding Proteins AT3G04080 33.742 1.37e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02644 K01510 - gmx:100806446 379.022