Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02629 ATGGAGAACTGTGCAGAGAATATTACCATGAATGGTGAAAGCAATGACGAATTTATTAACGTAGTTGATAGTGTGTCTGACTTGGTTCCTACGGTGAACATGTGTTTCGACAGTATGGAAGATGCAAAGAAATATTATTCAGATTATGGAAAAAGAATTGGATTTGGTGTTCGTACAAGAACTTCAAAAAAGGACAACAATAACGAATTGTATTATTTGAGATTGGTATGTTCAAGGGAAGGTAGATATGTCTCTAACATTCGTCCTGAAGTAAAAACCCTTCCTAGTCAAACAAAGCAATGCCCTGCGGGGATAACATTTGCCAAAAAAGATGACAAATGTGAGGACTGTTATGGTAGATCACAGTCATGA 372 0.3683 MENCAENITMNGESNDEFINVVDSVSDLVPTVNMCFDSMEDAKKYYSDYGKRIGFGVRTRTSKKDNNNELYYLRLVCSREGRYVSNIRPEVKTLPSQTKQCPAGITFAKKDDKCEDCYGRSQS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02629 123 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 113 - -
Vimu2g02629 123 Pfam FAR1 DNA-binding domain 44 111 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02629 Vimu-Chr2 22728005 22728884 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vimu2g02629 FAR1 2.7e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02629 - - vra:106766675 180.644