LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu2g02592	ATGGCTTATCAAAGCTTGGGGGTTGTGTATGGAGACTTGAGCACTTCCCCACTTTACGTTTACAAAAGCACTTTCATAGAGGATATTCAGCATTCAGATACCAATGAAGTAATCTATGGGGTGTTGTCTTTTGTTTTCTGGACGCTCACACTGATTCCACTGCTCAAGTATGTGTTCATTGTGCTGAGAGCTGATGACAATGGTGAGGGAGGGACCTTTGCTCTCTACTCCTTGCTCTGCCGCCACACCCGTGTTAGCTTGTTGCCTAACACTCAGCTTGCGGATGAGGACTTAACAGAGTACACCATGGACAATGGAACTGTTCCCATCAACAAGAAAAATGTTGGTTTGGGCTTGAAGAGCTTGTTAGAGAAATACAGGGTGCTGCAAAGGGTGTTGCTTATTCTCGCCTTGATAGGAACTTGCATGGTTATTGGGGATGGTGTGCTGGGATATTTACAGCTAAGCAACAAGTCTTTGGGGATAATTGAATTCACCGTAGCTCGCAGCCAACCGCAACTTAGCAACGCACTTCGCCAATTGCGGCGAGCACCAGTGCACCTCCCCCTCCTTTGCCGCACCTTGTGA	588	0.4745	MAYQSLGVVYGDLSTSPLYVYKSTFIEDIQHSDTNEVIYGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHTRVSLLPNTQLADEDLTEYTMDNGTVPINKKNVGLGLKSLLEKYRVLQRVLLILALIGTCMVIGDGVLGYLQLSNKSLGIIEFTVARSQPQLSNALRQLRRAPVHLPLLCRTL	195

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu2g02592	195	Pfam	K+ potassium transporter	3	150	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Vimu2g02592	195	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	1	151	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu2g02592	Vimu-Chr2	22244720	22245307	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu2g02592	1	195	Inorganic Solute Cotransporters	AT5G14880	62.051	1.26e-75	240

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu2g02592	K03549		-	gmx:100793387	283.878

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