Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02583 ATGGCGTTCTCCACAGCTAGCGTCACCGCTGCTCCCTATGGCTCATGGAAATCCCCCATCACCGGCGACGTTGTCTCTGGCGCGACCAAGGACCTGGGTGGCACCGCCGTGGATGGCCGTGGCCGCCTCATTTTGCTGGAATTCCGTCCATTAGAATCAGGGCGTGGAGTTCTTGTTCTTGAGCCAGAAAAAGTAGGAGGTGAGGCTGTGGATATTACTCCTAAGGAGTTTGGAGTGAGAACATTGGCTCAGGAATATGGAGGCGCTGCTTTTACTGTTTCAGAGGATGTTGTCTTCTTTGCAAATTACAATGATCAGAGGTTGTACAAGCAGTCCATCAGTTCTCTGGGTCAGTATTGCAAGCATGAGCCTCCTTTACCACTGACTCCGGATTATGGTGGACCTGTAGTCAGCTATGCTGATGGAATATTGGATGCACGATTTAACCGTTTTCTTTGTGTTAGGGAAGATCGTCGTGAAAGCAGTCTAAATCCACCTACAACTATTGTATCCATAGCACTTGGCAGCAAAAATGTTCAGGAACCAGTTGTTCTAGTTGGTGGGAGTGACTTCTATGCCTACCCACGTTTAGATTCTAAAAGTGAGAGAATAGCATGGATTCAGTGGAATCACCCCAACATGCCATGGGACAAAACAGAACTTTGGGTTGGCTATATTTCTGAAAATGGTGAGATCTACAAACGTGTTTGTGTTGCTGGGAATGATCCTTCACTTGTGGAGTCTCCAACTGAACCCAAGTGGTCCTCTGAGGGGGAGTTGTTTTTCATCACAGATAGAGAAAATGGTTTTTGGAATCTCCACAAATGGCATGGAAAGTCATATCTGGGCATTGTTGATGTAGAGGGCTCAAAGCTAACTGTGATTGATTTCCCTTGCACAGACATAAATAACATAACATCTGGTAATGATTTCTTGTACGTGGAGGGAGCATCTGAGGTTCTTCCATCATCAGTGGCCAAGGTGACTTTTGATGATGATAAATCAAAAGCAGTGGATTTCAATATTATCTGGTCCTCATCACCAGATAGTCTAAAGTATAGCTCATACATCAGTAAGCCAGAGTTGATTGAATTCCCAACTGTCGTTCCTGGTCAAAATGCTTATGCATACTTTTATCCACCATCTAATCCTGATTTCCAAGCTAGTGAAGAAGAAAAGCCTCCACTGTTATTGAAGAGTCACGGTAATTCTGGGGCATACAGAGAACGACTTTTGAGGCAGTGGGGAATAGTTGATGTTAATGACTGTTGTAGTTGTGCTACGTATTTGGTGGAGAGTGGAAAGGTGGATAAGGAGAGGCTGTGTATAATGGGTGGCTCTGCTGGTGGGTATACCACCTTGGCAGTTCTTGCTTTCAGAAATACTTTTCAGGCTGGTGCTTCTTTGTATGGAATAGCTGACTTGAATTTGTTGAGAGCAGAAACTCATAAGTTTGAATCCCATTATGTTGAAAATCTAGTTGGAGGTGATAAGGAGATGTATGAAAGATCTCCTATTAATCATGTTGATGATTTTTCTTGTCCCATTATAATATTTCAAGGATTGGAGGACAAGGTTGTGCCACCGGATCAAGCTGAAAAAATATACCAGGCAGTGAAGGAGAAAGGTGTGCCAGTTGCTCTTGTTGAGTATGAAGGGGAACAACACGGTTTCCGAAAGGCTGAGAACATTAAGAATACAATTGAACAAGAAATGGTATTCTTTGCTCGATTGATTGGGCACTTTGATGTTGCTGATGATATTACTCCTATCAAAATTGACAACTACGATTGCTAA 1797 0.4335 MAFSTASVTAAPYGSWKSPITGDVVSGATKDLGGTAVDGRGRLILLEFRPLESGRGVLVLEPEKVGGEAVDITPKEFGVRTLAQEYGGAAFTVSEDVVFFANYNDQRLYKQSISSLGQYCKHEPPLPLTPDYGGPVVSYADGILDARFNRFLCVREDRRESSLNPPTTIVSIALGSKNVQEPVVLVGGSDFYAYPRLDSKSERIAWIQWNHPNMPWDKTELWVGYISENGEIYKRVCVAGNDPSLVESPTEPKWSSEGELFFITDRENGFWNLHKWHGKSYLGIVDVEGSKLTVIDFPCTDINNITSGNDFLYVEGASEVLPSSVAKVTFDDDKSKAVDFNIIWSSSPDSLKYSSYISKPELIEFPTVVPGQNAYAYFYPPSNPDFQASEEEKPPLLLKSHGNSGAYRERLLRQWGIVDVNDCCSCATYLVESGKVDKERLCIMGGSAGGYTTLAVLAFRNTFQAGASLYGIADLNLLRAETHKFESHYVENLVGGDKEMYERSPINHVDDFSCPIIIFQGLEDKVVPPDQAEKIYQAVKEKGVPVALVEYEGEQHGFRKAENIKNTIEQEMVFFARLIGHFDVADDITPIKIDNYDC 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02583 598 Pfam Prolyl oligopeptidase family 401 580 IPR001375 GO:0006508|GO:0008236
Vimu2g02583 598 Gene3D alpha/beta hydrolase 352 585 IPR029058 -
Vimu2g02583 598 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 406 592 - -
Vimu2g02583 598 SUPERFAMILY DPP6 N-terminal domain-like 86 300 - -
Vimu2g02583 598 SUPERFAMILY alpha/beta-Hydrolases 360 578 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02583 Vimu-Chr2 22078304 22086532 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02583 8 597 Carbohydrate Esterase AT5G36210 61.161 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02583 - - gmx:100794040 1066.22