Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02581 ATGGCCACGTTAGCCATTGCTGCTCTCACTCTCGCTCGCACTTCTGCTTCTTCCAACTTCTTTTTTTCTCGCACCTTCAATCATTTCACTACAAAGTTCGTACCTTTCAGAATCTTACATCAACGACGTCGTTTCTTATGCCACAACTGCAAAAGGGGAATAGCATCTTCACCAGTCACCATCCCTTCCATTTCCGATAGAATGACCGCACCCTATGGTTCCTGGAAACGGGGAGTTCTTGTGGTTGAGGCAGAAAATCCGGGAGGTGAGGCTGTGGACATTACACCTAAGGAGTTTGGAGTGAGAACATTGGCTCAGGAATATGGAGGTGGTGCGTTTACTGTTTCAGGGGATGTTGTATTTTTTGCAAATTACAAAGATCAGAGATTGTACCAGCAGTCCATCAGTTCTCTGGATGTGCCTCCCATACCTCTTACTCCGGATTATGGGAGCCCAGTAGTCAGCTATGCTGATGGAATATATGATGGACGCTTTAACCGTTTTGTCAGTGTAAGGGAAGATCGTCGAGAGAGTGCTCAAAATCCATCTACAACAATTGTATCTGTAGCACTTGGAAGCAAAGATGTTCAGGAACCCCAGGTACTAGTTAGTGGAAGTGACTTCTATGCTTTCCCACGTCTTGATCCAAAAAGTGAAAGAATAGCTTGGATTCAGTGGAGTCATCCATACATGCCATGGGATAAATCAGAACTTTGGGTTGGCTATATTTCTGAAAACGGAGAGATCTACAAGCAGGTGTCTGTTGCGGGGAATGATCCTGCACTTGTGGAGTCCCCAACTGAGCCCAAGTGGTCTTCTGATGGGGAGCTGTTTTTCATCACGGATAGGGGAAATGGTTTTTGGAATCTCCATAAATGGATTGAGTCTGAGAACAAGGTCTTGCCTGTTTATTCTTTGGAGGCCGAGTTTGCAAGGCCGCTGTGGATTTTTGGCATGAATTCTTATGAATTTCTTAAAGGTCATATACAGAAAAATTTAATTGCTTGCAGTTACAGACAGCAGGGGAAGTCATATCTTGGAATTATCGATGATGTGCCAGACTCAAAGCTAATTCTGCTGGATATCCCTTTCACAGATATAGATAACATTACTTCTGGTAATGATTGCCTCTATGTGGAGGGAGCATCTGCTGTTTTTCCGTCATCAGTGGCCAAGGTGACTTTAGATAATGATAAATCTAAAGCAGTTGACTTCAACATTATTTGGTCCTCCTCACCGGATAGTTTGAAGTATGCTTCTTACTTTAGTAAACCTGAGTTGATTGAGTTCCCAACTGAAGTTCCTGGTCAAAATGCTTATGCATACTTTTACAAACCATGTAATCCTGATTTCCAAGCTAGTGCAGAAGAAAAGCCTCCATTATTATTGAAGAGCCATGGAGGACCAACCGCTGAAGCACGTGGAATTTTAAATTTGAGCATTCAGTACTGGACTAGTCGGGGTTGGGCTTTTGTTGATGTTAATTATGGTGGAAGCACTGGTTATGGCAGGGAGTTTCGTGAACGGCTTTTGGGACGTTGGGGAATAGTTGATGTCAATGACTGTTGTAGTTGTGCTACATACTTGGTTAACAATGGAAAAGTAGATGGGAAGCGGCTTTGTATTACAGGGGGCTCTGCTGGTGGGTATACCACCTTGGCAGCTCTTGCTTTTAAAGAAACTTTTAAGGCTGGTGCTTCTTTGTATGGTGTAGCTGACGTGAACTTGTTGAGAGCGGAAACTCATAAATTTGAATCTCATTATATCGATAGACTGGGTGGAGGTGAGAAAGGGTGCTATGAAAGATCACCAATCAATCATGTTGACAAATTTTCTTGTCCCATAATTTTATTTCAGGGGTTGGAGGACAAGGTTGTACCACCAGAACAAGCTCGAAAAATTTACCAGGCTCTAAAGGAAAAAGGTGTGCCAGTTGCTCTTGTTGAGCTGAGAACATTAAGTTTACACTTGAACAACAAATGGTCTTCTTTGCACGATTGGTTGGACACTTCAATGTTGCTGATGATATTACTCCTATCAAAATTGACAACTTTGATTGAGAATGGCGTTTTCAGTGGTTTGGTTGAATTTATTGCACTCATGAGCCTCTTCTGCCACAGCACAAACTACCCCATAGCCTTGGGTGAGGTTCATTCAGAGGGAGAAGGTAATTGTGAAGAAGTAAATGTGGATGGTGAAGTTGAGGTTGGTGTGGATGAGTTTGCTGTGGATGGAGAGGGGGGAGGGAAGGTTCAAAATGAGATTGTTATGGAGGGAGAGGGTCTACATGATGTTGGTCTAAAGGAAGATGATTTGCATGAGGTTGTTGTGGAGGGAGAGGGTGAGGGTCAAGATGAGTATTATGTTGGTAGTTCCAATAGGTTCAAACATGACGTCTTGAGTGAAGATTATCTAATGGATGTTAGTGTACATGGAGATGAAGTGGAAGATGATTTCTGGAAAGGTAGTGTCAAAGTTGAAGTGGGTGGACCAAGTGGGTCTTCTAGTCGATTTCAATATGTACATGATTGA 2532 0.4285 MATLAIAALTLARTSASSNFFFSRTFNHFTTKFVPFRILHQRRRFLCHNCKRGIASSPVTIPSISDRMTAPYGSWKRGVLVVEAENPGGEAVDITPKEFGVRTLAQEYGGGAFTVSGDVVFFANYKDQRLYQQSISSLDVPPIPLTPDYGSPVVSYADGIYDGRFNRFVSVREDRRESAQNPSTTIVSVALGSKDVQEPQVLVSGSDFYAFPRLDPKSERIAWIQWSHPYMPWDKSELWVGYISENGEIYKQVSVAGNDPALVESPTEPKWSSDGELFFITDRGNGFWNLHKWIESENKVLPVYSLEAEFARPLWIFGMNSYEFLKGHIQKNLIACSYRQQGKSYLGIIDDVPDSKLILLDIPFTDIDNITSGNDCLYVEGASAVFPSSVAKVTLDNDKSKAVDFNIIWSSSPDSLKYASYFSKPELIEFPTEVPGQNAYAYFYKPCNPDFQASAEEKPPLLLKSHGGPTAEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATYLVNNGKVDGKRLCITGGSAGGYTTLAALAFKETFKAGASLYGVADVNLLRAETHKFESHYIDRLGGGEKGCYERSPINHVDKFSCPIILFQGLEDKVVPPEQARKIYQALKEKGVPVALVELRTLSLHLNNKWSSLHDWLDTSMLLMILLLSKLTTLIENGVFSGLVEFIALMSLFCHSTNYPIALGEVHSEGEGNCEEVNVDGEVEVGVDEFAVDGEGGGKVQNEIVMEGEGLHDVGLKEDDLHEVVVEGEGEGQDEYYVGSSNRFKHDVLSEDYLMDVSVHGDEVEDDFWKGSVKVEVGGPSGSSSRFQYVHD 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02581 843 SUPERFAMILY DPP6 N-terminal domain-like 107 317 - -
Vimu2g02581 843 SUPERFAMILY alpha/beta-Hydrolases 411 669 IPR029058 -
Vimu2g02581 843 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 76 656 - -
Vimu2g02581 843 Pfam Prolyl oligopeptidase family 480 647 IPR001375 GO:0006508|GO:0008236
Vimu2g02581 843 Gene3D alpha/beta hydrolase 417 672 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02581 Vimu-Chr2 22057506 22073675 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02581 69 649 Carbohydrate Esterase AT5G36210 68.174 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02581 - - gmx:100784480 1168.68