Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02543 ATGTGGCTTTCTGGAATGATGCAAGCAACAACAAGGTGTAAGGAGCTTCTTTCCATGTGGGTTTTGGCTGCCAGTGGCAGTTATGCACTTCACCAATTCATGAAAGTTGTGGAGAGACTTGTTTTTGCTGAATTTACTTGCATTTTGGCATTAGGAGGGTCTATAATGGGGATAATTGCAGGAGGCATCAATGGGCAGACCACAGAAGCTGGTTTTGTTGATGGTGCTTGCAAAGGAGCTGTGACAGGGGCAATTGCTGCATTAGAATTGCTAAATAATGATGCAGATGCTGAACCTCTGTCTAAGTTTGCCCTATTATGGAGTTTGTTAAATGGAAAGCTATTTATGGAATGGATATGTCCAGTTGTTGCACAGGTCTATCAATATCATATGAATGCACATGGAACAAGTTACAGAGAAGAATCATCAGATATAAATAATGGCATTGTGATGGGAATCACAATCATCCAAGAACTTCCTGTTCAAATGTTCAATTCCAGTCAAATGTTCAATCTGTACAATGAGTCATGCTGCTCAATTTGCTTCCAG 549 0.4044 MWLSGMMQATTRCKELLSMWVLAASGSYALHQFMKVVERLVFAEFTCILALGGSIMGIIAGGINGQTTEAGFVDGACKGAVTGAIAALELLNNDADAEPLSKFALLWSLLNGKLFMEWICPVVAQVYQYHMNAHGTSYREESSDINNGIVMGITIIQELPVQMFNSSQMFNLYNESCCSICFQ 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02543 183 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 23 183 IPR044523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02543 Vimu-Chr2 21532788 21534152 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02543 43 183 C3H Transcription Factor Family AT5G66070 28.758 1.95e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02543 - K19041 gmx:100799697 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02543 2 21532788 21534152 Vimu2g02543 2 21532788 21534152 ECH
Vimu2g02543 2 21532788 21534152 Vimu1g00455 1 2753122 2754778 PCT