Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02525 ATGTTTTCCCTCTCAAAATCCAACTTCTCTCCTGTTCGCCCCACCCTCCCTCCGGTTCGCTGCGGCATCCGCGAGCTCCGCCAACGAATCCACACCGTCCAGACCACGCAAAAGATCACCGAAGCTATGAAGCTCGTCGCCGCCGCTAGGGTCCGCCGCGCTCAGGAGGCCGTCGTCAACGGCCGCCCCTTTGCCTCAAACCTCGCAGAAATGCTGAACGACATCACCCAGCGCCTAAAAAGCGACGATGTTTCCACCCCCCTCACTGATGTCAGGCCCGTTAAGACCGTCGCCCTCGTCGTTTTCACCGGCGACCGCGGCCTCTGCGGCGGTTTCAATAAATGGGTAATAAAAAAAGCCGTCACCCAAAGGAGGCTCAGGTCATTGCTGATGATATTTTCTCATTGTTTGTTAGTGAGGAGGTGGATAGAGTCGAACTTGTGTACACTAGGTTTGTTTCACTGGTTAGGTTTGAACCTGTGGTTCAGACTTTGCTGCCTCTGGGGGAGGTTTATGATGTGA 522 0.5479 MFSLSKSNFSPVRPTLPPVRCGIRELRQRIHTVQTTQKITEAMKLVAAARVRRAQEAVVNGRPFASNLAEMLNDITQRLKSDDVSTPLTDVRPVKTVALVVFTGDRGLCGGFNKWVIKKAVTQRRLRSLLMIFSHCLLVRRWIESNLCTLGLFHWLGLNLWFRLCCLWGRFMM 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02525 173 PANTHER ATP SYNTHASE GAMMA CHAIN 19 123 IPR000131 GO:0015986|GO:0045261|GO:0046933
Vimu2g02525 173 FunFam ATP synthase gamma chain, chloroplastic 21 88 - -
Vimu2g02525 173 Gene3D ATP synthase, gamma subunit, helix hairpin domain 24 134 - -
Vimu2g02525 173 Pfam ATP synthase 23 124 IPR000131 GO:0015986|GO:0045261|GO:0046933
Vimu2g02525 173 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 22 123 IPR035968 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02525 Vimu-Chr2 21226378 21227047 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02525 13 120 Primary Pumps ATPases AT1G15700 63.636 7.64e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02525 K02115 - gmx:100797879 194.897