Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02455 AGAGAAAAATTCAGAAGTATGGTACCACTCAGTCTGATCTCTGAATGTACCAAGAATTTGGCTAGTGAACATGCACAAGTAGTGCCTATTTCACTTTTTGCGGCTGTTCTCTGCCTTTGCTTGGTCATTGGTCACTTGCTTGAAGAAAATCGATGGATTAATGAATCCATAGTTGCCATCATAATTGGAATCATTGCTGGAATTATACTGTTATTGATCACCAAAGGAAAGAGTTCTCACATACTTACATTTAATGAAGAACTATTCTTCATATATCTCCTTCCTCCCATAATATTCAATGCAGGAGTTAACCCTCCTAACAGATTTCAGGTGAAGAAGAAACAATTCTTCCATAACTTTTTTACCATCATGATGTTTGGTGTCATCGGTGTTTTCATTTCAACTTTTGTTATTACTTGCGGCAGCTGGTGGATATTCCCCAAGTTGAACTTGCTTGGTCTGACAGGGAAAGATTATCTTGCTATAGGAACAATTTTCTCAGCAACGGACACAGTTTGTACCCTGCAGGTTCTGCATCAAGATGATACTCCTTTACTTTACAGCCTAGTCTTTGGGGAAGGAGTGGTAAATGATGCCACATCAGTTGTTCTCTTCAATGCAGTGCAAAAGCTTGATGTTTCAAAATTTAGCAGCAAGACATTCCGGTTTATTGGAGATTTCTTCTATCTATTCGGATTCAGCACTGGTCTAGGAGTTCTAGCTGGCCTCCTCACGTCATATATCTTGAAAGCCTTACGCTTTGGAAGACATTCAAGTGTTCGTGAAATTGCATTGATGATATTAATGGCATACCTATCCTATATGTTGGCAGAGCTATGTGATCTAAGTGGAATCATCACCGTTTTCTTTTGTGGAATACTCATGTCACATTATGCATGGTATAATGTGACTGAAACCTCAAGAATCACAACCAGGCATGTGTTTGCAACAATGTCATTTATTGCAGAAACCTTCATATTCCTCTATGTGGGCATGGATGCCCTTGACATAGAGAAATGGAAGATGACTAAATTAAGTTACGGAAGTTTGCTTGGGATATACAGTTCCCTAATCCTATTGATATTGGTTGGGCGTGCTGCATTTGTTTTCCCTCTCTCTGCTATTGCCAATTATACAAACACACGTGCTAGTTCTGACCAAGCATCACGCATCACTTTCAGACAGCAGATAATCGTTTGGTGGGCAGGGCTAATGAGGGGAGCTGTCTCCATTGCTCTGGCTTTCAAACAGTTCACATTTTCTGGAGTTACTTCTGATCCAGTTAAAGCAACAATGATTACCAACACCATTATTGTTGTCCTTTTCAGCACACTGGTGTTTGGTTTTCTAACAAAACCATTAATAAGATATCTGCTACCCCACGCTGCTACAAGGAAAAACATCGTCCATGAAGAATCAGGTCCACAAATTGAGGACTTGAATCTACCTTTGCTATCCCTTGAGGAGTCCGCAGCCACCAACATCAGCCGCGCAAAGGAAAGTTTGTCCATGTTAATAGAAAGTCCTGTGTTCACCATACATCACTATTGGAGGAGGTTTGATGATGCCTACATGAGACCTTTCTTTGGGGGACCTCATCATAACGAGTCACAGTGCTAG 1620 0.4062 REKFRSMVPLSLISECTKNLASEHAQVVPISLFAAVLCLCLVIGHLLEENRWINESIVAIIIGIIAGIILLLITKGKSSHILTFNEELFFIYLLPPIIFNAGVNPPNRFQVKKKQFFHNFFTIMMFGVIGVFISTFVITCGSWWIFPKLNLLGLTGKDYLAIGTIFSATDTVCTLQVLHQDDTPLLYSLVFGEGVVNDATSVVLFNAVQKLDVSKFSSKTFRFIGDFFYLFGFSTGLGVLAGLLTSYILKALRFGRHSSVREIALMILMAYLSYMLAELCDLSGIITVFFCGILMSHYAWYNVTETSRITTRHVFATMSFIAETFIFLYVGMDALDIEKWKMTKLSYGSLLGIYSSLILLILVGRAAFVFPLSAIANYTNTRASSDQASRITFRQQIIVWWAGLMRGAVSIALAFKQFTFSGVTSDPVKATMITNTIIVVLFSTLVFGFLTKPLIRYLLPHAATRKNIVHEESGPQIEDLNLPLLSLEESAATNISRAKESLSMLIESPVFTIHHYWRRFDDAYMRPFFGGPHHNESQC 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02455 539 Gene3D - 155 207 - -
Vimu2g02455 539 PANTHER SODIUM/HYDROGEN EXCHANGER 23 531 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Vimu2g02455 539 Pfam Sodium/hydrogen exchanger family 34 455 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02455 Vimu-Chr2 20322975 20327688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02455 17 539 Antiporters AT5G55470 67.614 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02455 - - gmx:100813332 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02455 2 20322975 20327688 Vimu2g02455 2 20322975 20327688 ECH