Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02428 TCCTCCTCTGAGAGTTCTTATGAATCAAACTTCCATGAATATGTTTCATCCAAGTCTGAGTGTGACAAGTTCACTATTCTTGACTTGCTTAATGGAGTATCCTCTGAATGCAGTTGTAGAGTTAGCTCTTCCACCAATGACATCGTCATTGACATGAAAAATGAACCATTCACTGGGAATTCTCAAAATCTTGATGGGTTTGACACAATTTCACAATTAGGCCTTCGTCCAATATTGACAAAGCTAGTGAAGTTTGATGATAAGGTCATTGAAGCCATTGAGTTGAGAAGATCAACTAAATTTGATGAGATAAATTCTCATCAATCTCAAGCTATTAAAGTTAGCAAAGAGGAAAGCAGTAGAACTAAGAGAGACAGAAAAATCAGTCCAGTATCTAGAATTTCCTTTGCTAATTCTACTGGCAAGAAAGTTCAAGCCTATGCAAGGAGTGTTTCATCCAAAGCAGGCAAGGCCTCAGTGGATACAGGGTTTCCAGAGGGATTTGCAGTTGTTAAGTCCTCACTTGATCCACAGAGAGACTTCAGGGAATCAATGGTGGAGATGATAGTGGAGAACAATATTCGAGCATAA 591 0.3892 SSSESSYESNFHEYVSSKSECDKFTILDLLNGVSSECSCRVSSSTNDIVIDMKNEPFTGNSQNLDGFDTISQLGLRPILTKLVKFDDKVIEAIELRRSTKFDEINSHQSQAIKVSKEESSRTKRDRKISPVSRISFANSTGKKVQAYARSVSSKAGKASVDTGFPEGFAVVKSSLDPQRDFRESMVEMIVENNIRA 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02428 196 ProSiteProfiles OVATE domain profile. 170 196 IPR006458 -
Vimu2g02428 196 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 76 195 IPR038933 GO:0045892
Vimu2g02428 196 Pfam Transcriptional repressor, ovate 174 195 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02428 Vimu-Chr2 20002768 20003394 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vimu2g02428 Ovate 1.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02428 - - gmx:100784032 296.589