Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02412 ATGGACATTGGTGTCGAAAACATTCCCTCACTTGCAATCTTACCTTTGTTCATCTTCTTGTTCACCATATTCTGGAGAACAAAAACCAAGTCTTCAAACTCCAAGTTACCACCAGGACCACCAAAACTACCCTTTATAGGAAACTTGCACCAGCTTGGAGCAATGCCTCATCATGGCCTGGCAAAACTTTCACACCACTATGGCCCTCTCATGCACATAAAACTTGGTGCTCTTTCCACCATAGTGGTGTCTTCCCCGCAAATGGCCAAGGAAGTGATGAAGACACATGACATCATTTTTGCAAATAGGCCTTATCTTCTTGCAGCAGATGTTATATCCTATGGCTCCAAGGGCATCAGTTTTTCCCCTTATGGCAGTTACTGGAGGCAGATGAGAAAAATTTGCACCTTTGAGCTACTAACTCCAAAGCGTGTTCAATCATTCAAAGCAATTAGAGAAGAGGAGGCTTCAAAGCTTGTTAAAGAGGTAGGTTTGAGAGAAGGGTCATCTACGAATGTCAGTAAGATGATCTATTCCTTCTCCTATGGATTGACATCAACTGTAGCTTTTGGAGGTAAATCCAAAGATCAAGAAGCTTTCATAGCTGTTATGAAAGATGTCTTAAAAGTTGTTGCTGGTTTCTCCCTGGCTGACTTGTATCCTGTTAAAGTGCTTCAAGTATTGACTGGATTAAGGTCCAGAGTTCAGAAGTTACATCAAGAAGTAGATAGGATCCTTGAGAAAATTGTGAGAGATCATAGGGTCACTGGTTCTGAAACAAAGGAAACCAATGAAAAAGGAGAGGATCTTGTTGATGTCTTGCTAAAGCTTCAGAAGCAGAACAACCTTGAGCATCCTCTATTCGACAACGTTATCAAAGCAACCATTTTGGATATCTTCAGTGCTGGAAGTGGTACTTCAGCTAAAACCATAGAGTGGGCCATGTCAGAACTTGTGAAAAACCCAAGGATCATGGAGAAAGCACAATCTGAGATAAGAAGGGTGTTTGGTGAAAAGGGGCATGTAGATGAAGCTAACCTCCATGAACTGAAGTACTTGAAGTCAATAATCAAAGAAACACTGCGACTACACCCTCCTGTTCCATTATTACTACCAAGAGAGTGCAGTGAGAGATGTGAAATCAGTGGGTATGAAATAGCAGCTAAAAGCAAGGTTATTGTTAATGCTTGGGCTATTGGAAGGGATCCAAAATATTGGAATGATGGTGAGAATTTTTGTCCAGAAAGGTTCCTTGATTGTTCAGTTGATTACAAAGGTGCAGATTTTCAGTTTATTCCATTTGGTGCTGGAAAGAGGATGTGCCCTGGAAGCACTTTTGGCATTGCTAATGTTGAACTGTTGCTAGCAAATTTACTTTTCCATTTTGATTGGAAGATGCCTGATGGGAATAAGCCTGAAGAGCTTGACATGACTGAATCATTTGGCTTGTCTGTTAGAAGAAAACATGATTTGTATTTGATTCCTTACATGTGCCAAACATTTGCTAATTACAACCATTGA 1521 0.4063 MDIGVENIPSLAILPLFIFLFTIFWRTKTKSSNSKLPPGPPKLPFIGNLHQLGAMPHHGLAKLSHHYGPLMHIKLGALSTIVVSSPQMAKEVMKTHDIIFANRPYLLAADVISYGSKGISFSPYGSYWRQMRKICTFELLTPKRVQSFKAIREEEASKLVKEVGLREGSSTNVSKMIYSFSYGLTSTVAFGGKSKDQEAFIAVMKDVLKVVAGFSLADLYPVKVLQVLTGLRSRVQKLHQEVDRILEKIVRDHRVTGSETKETNEKGEDLVDVLLKLQKQNNLEHPLFDNVIKATILDIFSAGSGTSAKTIEWAMSELVKNPRIMEKAQSEIRRVFGEKGHVDEANLHELKYLKSIIKETLRLHPPVPLLLPRECSERCEISGYEIAAKSKVIVNAWAIGRDPKYWNDGENFCPERFLDCSVDYKGADFQFIPFGAGKRMCPGSTFGIANVELLLANLLFHFDWKMPDGNKPEELDMTESFGLSVRRKHDLYLIPYMCQTFANYNH 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02412 506 FunFam Cytochrome P450 71D8 29 495 - -
Vimu2g02412 506 Pfam Cytochrome P450 37 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02412 506 Gene3D Cytochrome P450 22 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02412 506 PANTHER OS08G0105600 PROTEIN 60 496 - -
Vimu2g02412 506 CDD CYP71-like 67 491 - -
Vimu2g02412 506 Coils Coil 228 248 - -
Vimu2g02412 506 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02412 506 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02412 506 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02412 506 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02412 506 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02412 506 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02412 506 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02412 506 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02412 506 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02412 506 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02412 506 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02412 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vimu2g02412 506 SUPERFAMILY Cytochrome P450 37 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02412 Vimu-Chr2 19739562 19741704 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02412 13 499 Cytochrome P450 AT5G25120 40.927 3.04e-137 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02412 - - gmx:100818000 865.914