Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02411 ATGAAAGGAAGGGTTGATGAAAATTGCATCAATGAACTCAAATATTTGAAACTAGTTGTGAAAGAGACCTTGAGATTACACCCTCCAGTTCCTCTTTTGCTTCCAAGAGAATGTGGTCAAACGTGTGAGATACATGGCTATAACATACCTGCCAAAAGCAAGGTTATAGTCAATGCTTGGGCAATTGGAAGAGATTCAAACTATTGGACTGAACCAGAGAGGTTTCATCCCGAGAGATTCATTGACAGCAGTATTGACTACAAAGGAAATAATTTTGAGTACATTCCTTTTGGAGCTGGAAGAAGGATATGCCCTGGAATCACATTTGCATCCAGAGTTATGGAACTGGCCCTTGCAATGTTGCTGTATCACTTTGATTGGAAACTTCCAAGTGGAATGATATGTGGAGAATTGGACATGAGTGAAGAGTTTGGAGTCACAGTTAGAAGAAAGCATGATCTGCTACCAATCATAGGGAACATACACAACCTCGTTGGCTCACTTCCCCATCGTAGACTGAGAGATTTATCAGAAAAATATGGACCCTTGATGCATCTGAAGCTTGGAGAGGTTTGTACCATTGTGGTTTCATCTGCAGAGTGTGCTAAAGAAGTGTTAAAAACCCATGATCTTATCTTTGCATCAAGGCCACCAATACTAGCTTCAAAGATAATGTCTTATGATTCTATGGGGATTGCTTTTTCTCCTTATGGTGATTATTGGAGACAGCTAAGGAAGATTTGTGCGTTGGAGTTATTAAGCTCGAAACGTGTCCAATCTTTCCAGCCAATCAGAGAGGAAGAGCTCACTAAATTCATCAAAAGCATTGCTTCAAGAGAAGGGTCACCCATCAATCTCACCAAAGAAATCCTTACAACAATATCTACAATTGTTTCAAGGACAGCCCTTGGAAGCAAGTATAGGGACCATCAAAAATTCATATCAGCTGTAAGGAAAGCCACAGAGGTCGCTGGAGGTTTTGACTTGGGAGATTTGTACCCTTCTGCCGGATGGCTTCAGAACATCTCAGGGTTGAAGTCTAAGATTGAACAGTATCATCAACAAACTGATCAGATAATGCAAAGCATCGTGGATGATCACAGAGAAGCTAAATTAAGTGCTGCAAAAGGCCAGGTTGAACAAGTGGAGGATGATCTTGTAGATGTGCTAATGAAGGAGGAGTTTGGCTTAAGTGACAACGGTATCAAGGCGGTGATTTTGGATATCTATGGAGGGGGAAGTGAGACATCATCTACTACCATAACATGGGCAATGGCAGAGATAATAAAAGATGAAAGAGTAATGAAGAAGGTACAAGCTGAGGTAAGAGAGGTATTTGGTAAAGAAGGACAGGCTAATGAAAGTGACATGGAAAATCTAAAATATTTGAAATGTGTTGTGAAAGAGACATTGAGACTGCACCCTCCTGGTCCCCTTCTACTTCCAAGAGAGTGTGGAGAAGCTTGTGAGATAAAAGGGTATGACATACCAATGAAAAGCAAGATCATTATCAATGCTTGGGCAATTGGAAGAGACCCAAATCATTGGACTGAGGCAGAGAGGTTTTATCCTGAGAGGTTCATTGAAAGTGGTGTTGACTACAAAGGCAATAATTTTGAGTATATTCCATTTGGTGCTGGAAGAAGAATGTGCCCAGGCCTCACATTTGGCTTGACCACTGTTGAGTTTCCTCTTGCATTGTTAATCTATCATTTTGATTGGATAGTTCCCAATGGAATTAAGAATGAAGATTTGGATATGACTGAGGCCTTTGGAATATCCGTTGGTAGAAAATATGATTTGCAACTAATTCCTGTCACTTTCCGTCCTTGA 1833 0.4064 MKGRVDENCINELKYLKLVVKETLRLHPPVPLLLPRECGQTCEIHGYNIPAKSKVIVNAWAIGRDSNYWTEPERFHPERFIDSSIDYKGNNFEYIPFGAGRRICPGITFASRVMELALAMLLYHFDWKLPSGMICGELDMSEEFGVTVRRKHDLLPIIGNIHNLVGSLPHRRLRDLSEKYGPLMHLKLGEVCTIVVSSAECAKEVLKTHDLIFASRPPILASKIMSYDSMGIAFSPYGDYWRQLRKICALELLSSKRVQSFQPIREEELTKFIKSIASREGSPINLTKEILTTISTIVSRTALGSKYRDHQKFISAVRKATEVAGGFDLGDLYPSAGWLQNISGLKSKIEQYHQQTDQIMQSIVDDHREAKLSAAKGQVEQVEDDLVDVLMKEEFGLSDNGIKAVILDIYGGGSETSSTTITWAMAEIIKDERVMKKVQAEVREVFGKEGQANESDMENLKYLKCVVKETLRLHPPGPLLLPRECGEACEIKGYDIPMKSKIIINAWAIGRDPNHWTEAERFYPERFIESGVDYKGNNFEYIPFGAGRRMCPGLTFGLTTVEFPLALLIYHFDWIVPNGIKNEDLDMTEAFGISVGRKYDLQLIPVTFRP 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02411 610 Gene3D Cytochrome P450 4 151 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 PRINTS P450 superfamily signature 542 551 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 PRINTS P450 superfamily signature 412 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 Gene3D Cytochrome P450 152 606 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 SUPERFAMILY Cytochrome P450 155 605 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 PRINTS E-class P450 group I signature 293 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 PRINTS E-class P450 group I signature 505 529 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 PRINTS E-class P450 group I signature 401 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 PRINTS E-class P450 group I signature 464 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 PRINTS E-class P450 group I signature 421 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 PRINTS E-class P450 group I signature 541 551 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 PRINTS E-class P450 group I signature 551 574 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 PRINTS E-class P450 group I signature 201 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 PRINTS E-class P450 group I signature 177 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 PANTHER OS08G0105600 PROTEIN 172 607 - -
Vimu2g02411 610 Pfam Cytochrome P450 5 135 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 Pfam Cytochrome P450 154 591 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 SUPERFAMILY Cytochrome P450 4 154 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02411 610 FunFam Predicted protein 1 155 - -
Vimu2g02411 610 CDD CYP71-like 179 601 - -
Vimu2g02411 610 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 97 106 IPR017972 GO:0005506|GO:0016705
Vimu2g02411 610 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 544 553 IPR017972 GO:0005506|GO:0016705
Vimu2g02411 610 FunFam Cytochrome P450 71D8 156 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02411 Vimu-Chr2 19734523 19738357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02411 155 605 Cytochrome P450 AT3G26310 43.991 3.39e-140 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02411 - K13267 gmx:100813216 739.184