Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02399 ATGTCTCCTTCTTCACGCATTCTCCTCTTCCTCTTCACGCTCTCCCTTCTCTTCTCCCTCATATACGCCCATGGCGGCCACGACGACGGCGGCCACGGTGAACCCGACTCCAACGACATTACCGTTAACCTCCACTCGAGGACTTTGATCCTGGCGAAGGTGCGGTGTCTGATCGTGATCTTTTTGGCCACGTTCGTGTCCGGGGTGTCTCCCTATGTATTGAAATGGAACGAGGGGTTCTTGGTTCTGGGGACCCAGTTCGCCGGAGGAGTGTTTCTGGGAACTGCCATGATGCATTTTCTCAGCGATGCTAACGAGACTTTCGGGGATTTGACTACCACAGAGTACCCTTTCGCGTTCATGCTGGCTTGTGCCGGCTATTTGCTGACCATGCTCGCTGATTCTGTCATTTCCTCGGTTTTAGCGAAGGTGGGGCGTGATGGAGATGCAGTAGATGTCGAAGTTCAAGGTTGGTACTCTGGCTTCTGCTTCTGTTGGCTCATTGATTGCACCGATCACAACTTCGCAAGCCATTCACTTGGCTATGCCCATTCACTTGGAGACACCATATTGTTGATTGTTGCCCTTTGTGCACATTCTGTGTTTGAGGGCTTAGCAATAGGAGTTGCTGAGACAAAAGCAGATGCATGGAAGGCCTTATGGACAATCTGTCTGCACAAGATATTTGCAGCCATAGCCATGGGAATTGCACTCCTTAGAATGCTGCCTAACCGTCCCCTTATGTCATGTGCAGCCTATGCTTTCGCTTTTGCCATCTCCAGTCCAATTGGTGTGGCCATTGGAATCATTTTGGATGCCACAACACAAGGTCATGTGGCAGATTGGATCTTTGCCATATCGATGGGTCTGGCCTGTGGAGTGTTTATCTATGTATCAGTAAACCATCTGTTGGCAAAGGGATACAAACCACACAACCCAACAAAGGTTGACTCAGCCTATTTCAAGTTTTTTGCAGTGTTGTTGGGCGTGGGAGTGATAGCAGTTGTGATGATTTGGGATACCTAA 1026 0.4951 MSPSSRILLFLFTLSLLFSLIYAHGGHDDGGHGEPDSNDITVNLHSRTLILAKVRCLIVIFLATFVSGVSPYVLKWNEGFLVLGTQFAGGVFLGTAMMHFLSDANETFGDLTTTEYPFAFMLACAGYLLTMLADSVISSVLAKVGRDGDAVDVEVQGWYSGFCFCWLIDCTDHNFASHSLGYAHSLGDTILLIVALCAHSVFEGLAIGVAETKADAWKALWTICLHKIFAAIAMGIALLRMLPNRPLMSCAAYAFAFAISSPIGVAIGIILDATTQGHVADWIFAISMGLACGVFIYVSVNHLLAKGYKPHNPTKVDSAYFKFFAVLLGVGVIAVVMIWDT 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02399 341 PANTHER ZINC/IRON TRANSPORTER 53 335 - -
Vimu2g02399 341 Pfam ZIP Zinc transporter 189 336 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vimu2g02399 341 Pfam ZIP Zinc transporter 52 143 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02399 Vimu-Chr2 19597743 19599974 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02399 25 341 Inorganic Solute Cotransporters AT1G55910 61.846 3.42e-137 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02399 K14709 - gmx:100791239 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02399 2 19597743 19599974 Vimu2g02399 2 19597743 19599974 ECH